Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 BCRP1-201ENST00000444246 691 ntBASIC19.73■□□□□ 0.75
USP17L11C9JVI0 FAM86GP-201ENST00000448322 971 ntBASIC19.73■□□□□ 0.75
USP17L11C9JVI0 RN7SL589P-201ENST00000481268 310 ntBASIC19.73■□□□□ 0.75
USP17L11C9JVI0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 AC005412.3-201ENST00000580309 715 ntBASIC19.73■□□□□ 0.75
USP17L11C9JVI0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP17L11C9JVI0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.72■□□□□ 0.75
USP17L11C9JVI0 HMGA1P7-201ENST00000406908 502 ntBASIC19.72■□□□□ 0.75
USP17L11C9JVI0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 AC079140.1-201ENST00000508039 487 ntBASIC19.72■□□□□ 0.75
USP17L11C9JVI0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 AC015911.4-201ENST00000588022 1070 ntBASIC19.72■□□□□ 0.75
USP17L11C9JVI0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 AKAP8P1-201ENST00000434743 1349 ntBASIC19.72■□□□□ 0.75
USP17L11C9JVI0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP17L11C9JVI0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 CROCCP2-202ENST00000412962 2773 ntBASIC19.71■□□□□ 0.75
USP17L11C9JVI0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 AC243562.1-201ENST00000560672 389 ntBASIC19.71■□□□□ 0.75
USP17L11C9JVI0 RARRES2P8-201ENST00000566335 367 ntBASIC19.71■□□□□ 0.75
USP17L11C9JVI0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.71■□□□□ 0.75
USP17L11C9JVI0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms