Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PC-204ENST00000524491 1714 ntTSL 2 BASIC25.01■■□□□ 1.59
HFM1A2PYH4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
HFM1A2PYH4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
HFM1A2PYH4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
HFM1A2PYH4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC25.01■■□□□ 1.59
HFM1A2PYH4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
HFM1A2PYH4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
HFM1A2PYH4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC25.01■■□□□ 1.59
HFM1A2PYH4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
HFM1A2PYH4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC25.01■■□□□ 1.59
HFM1A2PYH4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC25.01■■□□□ 1.59
HFM1A2PYH4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC25.01■■□□□ 1.59
HFM1A2PYH4 LINC02084-201ENST00000606069 1096 ntBASIC25.01■■□□□ 1.59
HFM1A2PYH4 AL596442.2-201ENST00000610240 980 ntBASIC25.01■■□□□ 1.59
HFM1A2PYH4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
HFM1A2PYH4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC25.01■■□□□ 1.59
HFM1A2PYH4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC25.01■■□□□ 1.59
HFM1A2PYH4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
HFM1A2PYH4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC25.01■■□□□ 1.59
HFM1A2PYH4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC25.01■■□□□ 1.59
HFM1A2PYH4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
HFM1A2PYH4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC25■■□□□ 1.59
HFM1A2PYH4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
HFM1A2PYH4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC25■■□□□ 1.59
HFM1A2PYH4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
HFM1A2PYH4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC25■■□□□ 1.59
HFM1A2PYH4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC25■■□□□ 1.59
HFM1A2PYH4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
HFM1A2PYH4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC25■■□□□ 1.59
HFM1A2PYH4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC25■■□□□ 1.59
HFM1A2PYH4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
HFM1A2PYH4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC25■■□□□ 1.59
HFM1A2PYH4 AC079140.1-201ENST00000508039 487 ntBASIC25■■□□□ 1.59
HFM1A2PYH4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC25■■□□□ 1.59
HFM1A2PYH4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
HFM1A2PYH4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC25■■□□□ 1.59
HFM1A2PYH4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
HFM1A2PYH4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
HFM1A2PYH4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
HFM1A2PYH4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC25■■□□□ 1.59
HFM1A2PYH4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC25■■□□□ 1.59
HFM1A2PYH4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
HFM1A2PYH4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
HFM1A2PYH4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC25■■□□□ 1.59
HFM1A2PYH4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC25■■□□□ 1.59
HFM1A2PYH4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC25■■□□□ 1.59
HFM1A2PYH4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC25■■□□□ 1.59
HFM1A2PYH4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC25■■□□□ 1.59
HFM1A2PYH4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC25■■□□□ 1.59
HFM1A2PYH4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
HFM1A2PYH4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
HFM1A2PYH4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC24.99■■□□□ 1.59
HFM1A2PYH4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
HFM1A2PYH4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
HFM1A2PYH4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
HFM1A2PYH4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
HFM1A2PYH4 AL627223.1-201ENST00000416693 442 ntBASIC24.99■■□□□ 1.59
HFM1A2PYH4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
HFM1A2PYH4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
HFM1A2PYH4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
HFM1A2PYH4 AP002490.2-201ENST00000524791 560 ntBASIC24.99■■□□□ 1.59
HFM1A2PYH4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC24.99■■□□□ 1.59
HFM1A2PYH4 AC021097.1-201ENST00000607902 574 ntBASIC24.99■■□□□ 1.59
HFM1A2PYH4 AC084121.4-201ENST00000641598 221 ntBASIC24.99■■□□□ 1.59
HFM1A2PYH4 AF228730.8-201ENST00000642140 221 ntBASIC24.99■■□□□ 1.59
HFM1A2PYH4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
HFM1A2PYH4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC24.99■■□□□ 1.59
HFM1A2PYH4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
HFM1A2PYH4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC24.99■■□□□ 1.59
HFM1A2PYH4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
HFM1A2PYH4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
HFM1A2PYH4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC24.99■■□□□ 1.59
HFM1A2PYH4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
HFM1A2PYH4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC24.99■■□□□ 1.59
HFM1A2PYH4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
HFM1A2PYH4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
HFM1A2PYH4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
HFM1A2PYH4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
HFM1A2PYH4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
HFM1A2PYH4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC24.98■■□□□ 1.59
HFM1A2PYH4 TFAMP1-201ENST00000412727 736 ntBASIC24.98■■□□□ 1.59
HFM1A2PYH4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
HFM1A2PYH4 AC069335.1-201ENST00000489972 472 ntBASIC24.98■■□□□ 1.59
HFM1A2PYH4 FAM86C2P-203ENST00000528684 1004 ntBASIC24.98■■□□□ 1.59
HFM1A2PYH4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
HFM1A2PYH4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
HFM1A2PYH4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
HFM1A2PYH4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
HFM1A2PYH4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
HFM1A2PYH4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC24.98■■□□□ 1.59
HFM1A2PYH4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC24.98■■□□□ 1.59
HFM1A2PYH4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
HFM1A2PYH4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
HFM1A2PYH4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
HFM1A2PYH4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC24.98■■□□□ 1.59
HFM1A2PYH4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
HFM1A2PYH4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
HFM1A2PYH4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
HFM1A2PYH4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
HFM1A2PYH4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms