Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 LINC00895-201ENST00000629028 1637 ntBASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 COX11-210ENST00000639671 696 ntBASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
ARFGEF1Q9Y6D6 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ARFGEF1Q9Y6D6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARFGEF1Q9Y6D6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARFGEF1Q9Y6D6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.58■□□□□ 0.89
ARFGEF1Q9Y6D6 AL023806.1-201ENST00000603994 1649 ntBASIC20.58■□□□□ 0.89
ARFGEF1Q9Y6D6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARFGEF1Q9Y6D6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ARFGEF1Q9Y6D6 SPDYE19P-201ENST00000338590 713 ntBASIC20.58■□□□□ 0.89
ARFGEF1Q9Y6D6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARFGEF1Q9Y6D6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.58■□□□□ 0.89
ARFGEF1Q9Y6D6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ARFGEF1Q9Y6D6 AC011495.1-201ENST00000498085 584 ntBASIC20.58■□□□□ 0.89
ARFGEF1Q9Y6D6 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC20.58■□□□□ 0.89
ARFGEF1Q9Y6D6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC20.58■□□□□ 0.89
ARFGEF1Q9Y6D6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC20.58■□□□□ 0.89
ARFGEF1Q9Y6D6 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC20.58■□□□□ 0.89
ARFGEF1Q9Y6D6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC20.58■□□□□ 0.89
ARFGEF1Q9Y6D6 REXO1L9P-201ENST00000604264 2108 ntBASIC20.58■□□□□ 0.89
ARFGEF1Q9Y6D6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ARFGEF1Q9Y6D6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC20.58■□□□□ 0.89
ARFGEF1Q9Y6D6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.58■□□□□ 0.89
ARFGEF1Q9Y6D6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.58■□□□□ 0.89
ARFGEF1Q9Y6D6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARFGEF1Q9Y6D6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARFGEF1Q9Y6D6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ARFGEF1Q9Y6D6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARFGEF1Q9Y6D6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC20.58■□□□□ 0.88
ARFGEF1Q9Y6D6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
ARFGEF1Q9Y6D6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARFGEF1Q9Y6D6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARFGEF1Q9Y6D6 ANKRD19P-201ENST00000338192 862 ntBASIC20.57■□□□□ 0.88
ARFGEF1Q9Y6D6 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARFGEF1Q9Y6D6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARFGEF1Q9Y6D6 AC007389.4-201ENST00000454674 793 ntBASIC20.57■□□□□ 0.88
ARFGEF1Q9Y6D6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARFGEF1Q9Y6D6 RN7SL752P-201ENST00000463779 287 ntBASIC20.57■□□□□ 0.88
ARFGEF1Q9Y6D6 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARFGEF1Q9Y6D6 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
ARFGEF1Q9Y6D6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARFGEF1Q9Y6D6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ARFGEF1Q9Y6D6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARFGEF1Q9Y6D6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARFGEF1Q9Y6D6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARFGEF1Q9Y6D6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.57■□□□□ 0.88
ARFGEF1Q9Y6D6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ARFGEF1Q9Y6D6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARFGEF1Q9Y6D6 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
ARFGEF1Q9Y6D6 HIST1H2BPS3-201ENST00000419683 341 ntBASIC20.57■□□□□ 0.88
ARFGEF1Q9Y6D6 AC131009.4-201ENST00000624048 1740 ntBASIC20.57■□□□□ 0.88
ARFGEF1Q9Y6D6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ARFGEF1Q9Y6D6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 GNAQP1-201ENST00000444815 1067 ntBASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 RN7SL828P-201ENST00000607615 303 ntBASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 KRT18P55-202ENST00000578578 1546 ntBASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARFGEF1Q9Y6D6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARFGEF1Q9Y6D6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARFGEF1Q9Y6D6 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARFGEF1Q9Y6D6 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms