Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 RPS15P9-201ENST00000494093 319 ntBASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 FAM197Y3-203ENST00000618346 717 ntBASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 AC023511.2-201ENST00000618803 211 ntBASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 GPR89P-201ENST00000407924 1495 ntBASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 EGFEM1P-202ENST00000431685 1563 ntBASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
COL4A3BPQ9Y5P4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 AL591424.1-201ENST00000442569 1213 ntBASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 AL805961.1-202ENST00000641562 540 ntBASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A3BPQ9Y5P4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 PMS2P7-201ENST00000506558 1336 ntBASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 AC008667.4-201ENST00000607370 168 ntBASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
COL4A3BPQ9Y5P4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL4A3BPQ9Y5P4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL4A3BPQ9Y5P4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL4A3BPQ9Y5P4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL4A3BPQ9Y5P4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.1■□□□□ 0.65
COL4A3BPQ9Y5P4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.1■□□□□ 0.65
COL4A3BPQ9Y5P4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.1■□□□□ 0.65
COL4A3BPQ9Y5P4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL4A3BPQ9Y5P4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL4A3BPQ9Y5P4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL4A3BPQ9Y5P4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.1■□□□□ 0.65
COL4A3BPQ9Y5P4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL4A3BPQ9Y5P4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.1■□□□□ 0.65
COL4A3BPQ9Y5P4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.1■□□□□ 0.65
COL4A3BPQ9Y5P4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
COL4A3BPQ9Y5P4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.1■□□□□ 0.65
COL4A3BPQ9Y5P4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL4A3BPQ9Y5P4 IGHV3-65-201ENST00000523210 341 ntBASIC19.1■□□□□ 0.65
COL4A3BPQ9Y5P4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.1■□□□□ 0.65
COL4A3BPQ9Y5P4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms