Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
SSX2IPQ9Y2D8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSX2IPQ9Y2D8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.4■□□□□ 0.54
SSX2IPQ9Y2D8 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSX2IPQ9Y2D8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.4■□□□□ 0.54
SSX2IPQ9Y2D8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSX2IPQ9Y2D8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.4■□□□□ 0.54
SSX2IPQ9Y2D8 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSX2IPQ9Y2D8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SSX2IPQ9Y2D8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SSX2IPQ9Y2D8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.39■□□□□ 0.54
SSX2IPQ9Y2D8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SSX2IPQ9Y2D8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
SSX2IPQ9Y2D8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SSX2IPQ9Y2D8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
SSX2IPQ9Y2D8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
SSX2IPQ9Y2D8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSX2IPQ9Y2D8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.39■□□□□ 0.53
SSX2IPQ9Y2D8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.39■□□□□ 0.53
SSX2IPQ9Y2D8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.39■□□□□ 0.53
SSX2IPQ9Y2D8 AP002472.1-201ENST00000577490 586 ntBASIC18.39■□□□□ 0.53
SSX2IPQ9Y2D8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.39■□□□□ 0.53
SSX2IPQ9Y2D8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.39■□□□□ 0.53
SSX2IPQ9Y2D8 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.39■□□□□ 0.53
SSX2IPQ9Y2D8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SSX2IPQ9Y2D8 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.39■□□□□ 0.53
SSX2IPQ9Y2D8 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSX2IPQ9Y2D8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SSX2IPQ9Y2D8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
SSX2IPQ9Y2D8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SSX2IPQ9Y2D8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SSX2IPQ9Y2D8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SSX2IPQ9Y2D8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SSX2IPQ9Y2D8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSX2IPQ9Y2D8 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.39■□□□□ 0.53
SSX2IPQ9Y2D8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.39■□□□□ 0.53
SSX2IPQ9Y2D8 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSX2IPQ9Y2D8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SSX2IPQ9Y2D8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 PKD1P5-201ENST00000532415 10291 ntBASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 FAM58CP-201ENST00000435741 640 ntBASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 AP000344.2-201ENST00000512987 629 ntBASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SSX2IPQ9Y2D8 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 AL645939.2-201ENST00000427340 991 ntBASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.37■□□□□ 0.53
SSX2IPQ9Y2D8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms