Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.22■□□□□ 0.51
CISHQ9NSE2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.22■□□□□ 0.51
CISHQ9NSE2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.22■□□□□ 0.51
CISHQ9NSE2 GGTLC5P-201ENST00000617623 998 ntBASIC18.22■□□□□ 0.51
CISHQ9NSE2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.22■□□□□ 0.51
CISHQ9NSE2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CISHQ9NSE2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CISHQ9NSE2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CISHQ9NSE2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CISHQ9NSE2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CISHQ9NSE2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
CISHQ9NSE2 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CISHQ9NSE2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CISHQ9NSE2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CISHQ9NSE2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.22■□□□□ 0.51
CISHQ9NSE2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
CISHQ9NSE2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CISHQ9NSE2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CISHQ9NSE2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CISHQ9NSE2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CISHQ9NSE2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CISHQ9NSE2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CISHQ9NSE2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.21■□□□□ 0.51
CISHQ9NSE2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
CISHQ9NSE2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.21■□□□□ 0.51
CISHQ9NSE2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.21■□□□□ 0.51
CISHQ9NSE2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CISHQ9NSE2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CISHQ9NSE2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CISHQ9NSE2 AC005915.1-201ENST00000624912 2018 ntBASIC18.21■□□□□ 0.51
CISHQ9NSE2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CISHQ9NSE2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CISHQ9NSE2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CISHQ9NSE2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CISHQ9NSE2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CISHQ9NSE2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CISHQ9NSE2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CISHQ9NSE2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CISHQ9NSE2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CISHQ9NSE2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CISHQ9NSE2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.2■□□□□ 0.5
CISHQ9NSE2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CISHQ9NSE2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CISHQ9NSE2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CISHQ9NSE2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CISHQ9NSE2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.2■□□□□ 0.5
CISHQ9NSE2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CISHQ9NSE2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CISHQ9NSE2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
CISHQ9NSE2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CISHQ9NSE2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CISHQ9NSE2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CISHQ9NSE2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CISHQ9NSE2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CISHQ9NSE2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.2■□□□□ 0.5
CISHQ9NSE2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CISHQ9NSE2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CISHQ9NSE2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CISHQ9NSE2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
CISHQ9NSE2 AC108073.2-201ENST00000464002 357 ntBASIC18.2■□□□□ 0.5
CISHQ9NSE2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.2■□□□□ 0.5
CISHQ9NSE2 SLC25A6P2-201ENST00000497974 877 ntBASIC18.2■□□□□ 0.5
CISHQ9NSE2 UNC93B6-202ENST00000528242 690 ntBASIC18.2■□□□□ 0.5
CISHQ9NSE2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.2■□□□□ 0.5
CISHQ9NSE2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.2■□□□□ 0.5
CISHQ9NSE2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CISHQ9NSE2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.2■□□□□ 0.5
CISHQ9NSE2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.2■□□□□ 0.5
CISHQ9NSE2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.2■□□□□ 0.5
CISHQ9NSE2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CISHQ9NSE2 AC105020.1-201ENST00000435356 2205 ntBASIC18.2■□□□□ 0.5
CISHQ9NSE2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
CISHQ9NSE2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
CISHQ9NSE2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CISHQ9NSE2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CISHQ9NSE2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CISHQ9NSE2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CISHQ9NSE2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.2■□□□□ 0.5
CISHQ9NSE2 PCDHA12-202ENST00000613593 2588 ntBASIC18.2■□□□□ 0.5
CISHQ9NSE2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CISHQ9NSE2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.2■□□□□ 0.5
CISHQ9NSE2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.2■□□□□ 0.5
CISHQ9NSE2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CISHQ9NSE2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CISHQ9NSE2 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CISHQ9NSE2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CISHQ9NSE2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.19■□□□□ 0.5
CISHQ9NSE2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CISHQ9NSE2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.19■□□□□ 0.5
CISHQ9NSE2 AC002310.6-201ENST00000624451 1377 ntBASIC18.19■□□□□ 0.5
CISHQ9NSE2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CISHQ9NSE2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CISHQ9NSE2 AD000864.1-201ENST00000624076 2295 ntBASIC18.19■□□□□ 0.5
CISHQ9NSE2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CISHQ9NSE2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CISHQ9NSE2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CISHQ9NSE2 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CISHQ9NSE2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CISHQ9NSE2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.19■□□□□ 0.5
CISHQ9NSE2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms