Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR9Q9NR96 BCL2-203ENST00000589955 5011 ntBASIC18.06■□□□□ 0.48
TLR9Q9NR96 BICD1-207ENST00000551848 1962 ntBASIC18.06■□□□□ 0.48
TLR9Q9NR96 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR9Q9NR96 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR9Q9NR96 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TLR9Q9NR96 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR9Q9NR96 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR9Q9NR96 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR9Q9NR96 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR9Q9NR96 MIR661-201ENST00000384842 89 ntBASIC18.06■□□□□ 0.48
TLR9Q9NR96 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TLR9Q9NR96 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TLR9Q9NR96 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 SPDYE14P-201ENST00000442619 822 ntBASIC18.06■□□□□ 0.48
TLR9Q9NR96 FAM207CP-201ENST00000443486 507 ntBASIC18.06■□□□□ 0.48
TLR9Q9NR96 UGT1A2P-201ENST00000454886 866 ntBASIC18.06■□□□□ 0.48
TLR9Q9NR96 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 SLC25A39P2-201ENST00000537614 270 ntBASIC18.06■□□□□ 0.48
TLR9Q9NR96 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TLR9Q9NR96 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR9Q9NR96 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR9Q9NR96 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.06■□□□□ 0.48
TLR9Q9NR96 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TLR9Q9NR96 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TLR9Q9NR96 AL354751.1-201ENST00000412768 1863 ntBASIC18.05■□□□□ 0.48
TLR9Q9NR96 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TLR9Q9NR96 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.05■□□□□ 0.48
TLR9Q9NR96 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TLR9Q9NR96 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TLR9Q9NR96 AC138028.4-201ENST00000564984 1845 ntBASIC18.05■□□□□ 0.48
TLR9Q9NR96 NOC2LP1-202ENST00000452600 2235 ntBASIC18.05■□□□□ 0.48
TLR9Q9NR96 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.05■□□□□ 0.48
TLR9Q9NR96 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TLR9Q9NR96 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TLR9Q9NR96 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TLR9Q9NR96 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TLR9Q9NR96 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.05■□□□□ 0.48
TLR9Q9NR96 AC109635.5-201ENST00000533593 962 ntBASIC18.05■□□□□ 0.48
TLR9Q9NR96 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.05■□□□□ 0.48
TLR9Q9NR96 AC084121.4-201ENST00000641598 221 ntBASIC18.05■□□□□ 0.48
TLR9Q9NR96 AF228730.8-201ENST00000642140 221 ntBASIC18.05■□□□□ 0.48
TLR9Q9NR96 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.05■□□□□ 0.48
TLR9Q9NR96 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TLR9Q9NR96 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TLR9Q9NR96 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TLR9Q9NR96 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
TLR9Q9NR96 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TLR9Q9NR96 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TLR9Q9NR96 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TLR9Q9NR96 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TLR9Q9NR96 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TLR9Q9NR96 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TLR9Q9NR96 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TLR9Q9NR96 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.04■□□□□ 0.48
TLR9Q9NR96 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TLR9Q9NR96 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TLR9Q9NR96 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.04■□□□□ 0.48
TLR9Q9NR96 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TLR9Q9NR96 NOC2LP2-201ENST00000407594 1944 ntBASIC18.04■□□□□ 0.48
TLR9Q9NR96 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.04■□□□□ 0.48
TLR9Q9NR96 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TLR9Q9NR96 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.04■□□□□ 0.48
TLR9Q9NR96 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TLR9Q9NR96 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.04■□□□□ 0.48
TLR9Q9NR96 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TLR9Q9NR96 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TLR9Q9NR96 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TLR9Q9NR96 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.04■□□□□ 0.48
TLR9Q9NR96 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.04■□□□□ 0.48
TLR9Q9NR96 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.04■□□□□ 0.48
TLR9Q9NR96 AC005225.4-201ENST00000557330 545 ntBASIC18.04■□□□□ 0.48
TLR9Q9NR96 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TLR9Q9NR96 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.04■□□□□ 0.48
TLR9Q9NR96 AL158211.3-201ENST00000607385 239 ntBASIC18.04■□□□□ 0.48
TLR9Q9NR96 AL008721.1-201ENST00000609964 604 ntBASIC18.04■□□□□ 0.48
TLR9Q9NR96 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TLR9Q9NR96 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TLR9Q9NR96 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TLR9Q9NR96 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TLR9Q9NR96 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms