Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 CDC14C-201ENST00000428251 1719 ntBASIC15.66■□□□□ 0.1
CHD8Q9HCK8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 FAM220BP-201ENST00000377689 816 ntBASIC15.66■□□□□ 0.1
CHD8Q9HCK8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 AL022328.3-201ENST00000607943 679 ntBASIC15.66■□□□□ 0.1
CHD8Q9HCK8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.66■□□□□ 0.1
CHD8Q9HCK8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 AC091167.2-201ENST00000579581 588 ntBASIC15.65■□□□□ 0.1
CHD8Q9HCK8 MIR3619-201ENST00000579667 83 ntBASIC15.65■□□□□ 0.1
CHD8Q9HCK8 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHD8Q9HCK8 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
CHD8Q9HCK8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 YBX1P6-201ENST00000442962 1002 ntBASIC15.64■□□□□ 0.09
CHD8Q9HCK8 AC114501.1-201ENST00000445949 172 ntBASIC15.64■□□□□ 0.09
CHD8Q9HCK8 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 CHMP4BP1-201ENST00000556017 588 ntBASIC15.64■□□□□ 0.09
CHD8Q9HCK8 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 AC073389.1-201ENST00000595595 795 ntBASIC15.64■□□□□ 0.09
CHD8Q9HCK8 AL008638.5-201ENST00000623814 1298 ntBASIC15.64■□□□□ 0.09
CHD8Q9HCK8 AC138627.1-207ENST00000641560 1006 ntBASIC15.64■□□□□ 0.09
CHD8Q9HCK8 NOC2LP1-202ENST00000452600 2235 ntBASIC15.64■□□□□ 0.09
CHD8Q9HCK8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHD8Q9HCK8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHD8Q9HCK8 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms