Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 AL662844.1-201ENST00000546340 181 ntBASIC14.99□□□□□ -0.01
CDH20Q9HBT6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 AC006557.2-201ENST00000592985 1240 ntBASIC14.99□□□□□ -0.01
CDH20Q9HBT6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 AC025062.2-201ENST00000605477 670 ntBASIC14.99□□□□□ -0.01
CDH20Q9HBT6 AL773604.1-201ENST00000617417 272 ntBASIC14.99□□□□□ -0.01
CDH20Q9HBT6 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CDH20Q9HBT6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 AC093909.1-201ENST00000504731 1122 ntBASIC14.98□□□□□ -0.01
CDH20Q9HBT6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 AC104692.2-201ENST00000603054 253 ntBASIC14.98□□□□□ -0.01
CDH20Q9HBT6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 AC107918.4-202ENST00000641623 219 ntBASIC14.98□□□□□ -0.01
CDH20Q9HBT6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDH20Q9HBT6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 AC018712.1-201ENST00000455767 687 ntBASIC14.97□□□□□ -0.01
CDH20Q9HBT6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 AL139424.1-201ENST00000607572 797 ntBASIC14.97□□□□□ -0.01
CDH20Q9HBT6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms