Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BRF2Q9HAW0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
BRF2Q9HAW0 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.35■□□□□ 0.21
BRF2Q9HAW0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 PRELID1P1-202ENST00000567272 903 ntBASIC16.35■□□□□ 0.21
BRF2Q9HAW0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 AC064862.7-201ENST00000604520 867 ntBASIC16.35■□□□□ 0.21
BRF2Q9HAW0 AL139424.1-201ENST00000607572 797 ntBASIC16.35■□□□□ 0.21
BRF2Q9HAW0 REXO1L6P-202ENST00000619970 1078 ntBASIC16.35■□□□□ 0.21
BRF2Q9HAW0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
BRF2Q9HAW0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 AC124067.4-201ENST00000519691 2379 ntBASIC16.34■□□□□ 0.21
BRF2Q9HAW0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 FGFR3P6-201ENST00000457012 610 ntBASIC16.34■□□□□ 0.21
BRF2Q9HAW0 SCARNA2-201ENST00000458748 420 ntBASIC16.34■□□□□ 0.21
BRF2Q9HAW0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 TERC-201ENST00000602385 541 ntBASIC16.34■□□□□ 0.21
BRF2Q9HAW0 AC008608.2-201ENST00000606089 416 ntBASIC16.34■□□□□ 0.21
BRF2Q9HAW0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 AC243591.1-201ENST00000452967 1364 ntBASIC16.34■□□□□ 0.21
BRF2Q9HAW0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRF2Q9HAW0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
BRF2Q9HAW0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
BRF2Q9HAW0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.33■□□□□ 0.21
BRF2Q9HAW0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
BRF2Q9HAW0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
BRF2Q9HAW0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
BRF2Q9HAW0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
BRF2Q9HAW0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
BRF2Q9HAW0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms