Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.9■□□□□ 0.3
HDAC8Q9BY41 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.9■□□□□ 0.3
HDAC8Q9BY41 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.9■□□□□ 0.3
HDAC8Q9BY41 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HDAC8Q9BY41 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.9■□□□□ 0.3
HDAC8Q9BY41 AC022145.2-201ENST00000598203 171 ntBASIC16.9■□□□□ 0.3
HDAC8Q9BY41 AL009183.1-201ENST00000603760 355 ntBASIC16.9■□□□□ 0.3
HDAC8Q9BY41 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.9■□□□□ 0.3
HDAC8Q9BY41 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.9■□□□□ 0.3
HDAC8Q9BY41 RNF165-205ENST00000588679 2904 ntBASIC16.9■□□□□ 0.3
HDAC8Q9BY41 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC8Q9BY41 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC8Q9BY41 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC8Q9BY41 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC8Q9BY41 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC8Q9BY41 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HDAC8Q9BY41 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.9■□□□□ 0.3
HDAC8Q9BY41 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC8Q9BY41 AC131009.4-201ENST00000624048 1740 ntBASIC16.9■□□□□ 0.3
HDAC8Q9BY41 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC8Q9BY41 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.9■□□□□ 0.3
HDAC8Q9BY41 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HDAC8Q9BY41 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.89■□□□□ 0.3
HDAC8Q9BY41 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.89■□□□□ 0.3
HDAC8Q9BY41 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HDAC8Q9BY41 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
HDAC8Q9BY41 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 AC004461.1-201ENST00000412461 403 ntBASIC16.89■□□□□ 0.29
HDAC8Q9BY41 AC092474.2-201ENST00000424288 719 ntBASIC16.89■□□□□ 0.29
HDAC8Q9BY41 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 MIR3909-201ENST00000579518 119 ntBASIC16.89■□□□□ 0.29
HDAC8Q9BY41 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 AC026120.1-201ENST00000611536 926 ntBASIC16.89■□□□□ 0.29
HDAC8Q9BY41 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 TUBB8P12-201ENST00000308911 1335 ntBASIC16.89■□□□□ 0.29
HDAC8Q9BY41 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 TUBB7P-202ENST00000428444 1305 ntBASIC16.89■□□□□ 0.29
HDAC8Q9BY41 TUBB8P7-204ENST00000567960 1332 ntBASIC16.89■□□□□ 0.29
HDAC8Q9BY41 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HDAC8Q9BY41 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 RNU1-129P-201ENST00000384064 167 ntBASIC16.88■□□□□ 0.29
HDAC8Q9BY41 RN7SL589P-201ENST00000481268 310 ntBASIC16.88■□□□□ 0.29
HDAC8Q9BY41 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 U1.21-201ENST00000580816 167 ntBASIC16.88■□□□□ 0.29
HDAC8Q9BY41 MIR4492-201ENST00000581627 80 ntBASIC16.88■□□□□ 0.29
HDAC8Q9BY41 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 AKAP8P1-201ENST00000434743 1349 ntBASIC16.88■□□□□ 0.29
HDAC8Q9BY41 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 PP12613-201ENST00000424958 2230 ntBASIC16.88■□□□□ 0.29
HDAC8Q9BY41 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HDAC8Q9BY41 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HDAC8Q9BY41 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms