Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.02□□□□□ -0.32
VGLL1Q99990 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VGLL1Q99990 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VGLL1Q99990 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VGLL1Q99990 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VGLL1Q99990 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VGLL1Q99990 TSPY5P-201ENST00000426936 936 ntBASIC13.02□□□□□ -0.33
VGLL1Q99990 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VGLL1Q99990 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.02□□□□□ -0.33
VGLL1Q99990 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VGLL1Q99990 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
VGLL1Q99990 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VGLL1Q99990 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VGLL1Q99990 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.02□□□□□ -0.33
VGLL1Q99990 AC097493.4-201ENST00000641197 219 ntBASIC13.02□□□□□ -0.33
VGLL1Q99990 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VGLL1Q99990 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.02□□□□□ -0.33
VGLL1Q99990 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VGLL1Q99990 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.02□□□□□ -0.33
VGLL1Q99990 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VGLL1Q99990 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
VGLL1Q99990 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.02□□□□□ -0.33
VGLL1Q99990 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VGLL1Q99990 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.02□□□□□ -0.33
VGLL1Q99990 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.02□□□□□ -0.33
VGLL1Q99990 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
VGLL1Q99990 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.02□□□□□ -0.33
VGLL1Q99990 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
VGLL1Q99990 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
VGLL1Q99990 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VGLL1Q99990 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
VGLL1Q99990 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VGLL1Q99990 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
VGLL1Q99990 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VGLL1Q99990 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
VGLL1Q99990 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
VGLL1Q99990 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
VGLL1Q99990 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.02□□□□□ -0.33
VGLL1Q99990 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.02□□□□□ -0.33
VGLL1Q99990 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.01□□□□□ -0.33
VGLL1Q99990 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
VGLL1Q99990 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.01□□□□□ -0.33
VGLL1Q99990 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
VGLL1Q99990 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
VGLL1Q99990 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.01□□□□□ -0.33
VGLL1Q99990 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
VGLL1Q99990 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
VGLL1Q99990 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 RNF152P1-201ENST00000397754 604 ntBASIC13.01□□□□□ -0.33
VGLL1Q99990 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.01□□□□□ -0.33
VGLL1Q99990 HOMER2P1-201ENST00000455653 964 ntBASIC13.01□□□□□ -0.33
VGLL1Q99990 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.01□□□□□ -0.33
VGLL1Q99990 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
VGLL1Q99990 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.01□□□□□ -0.33
VGLL1Q99990 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 HYMAI.1-201ENST00000620949 238 ntBASIC13.01□□□□□ -0.33
VGLL1Q99990 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
VGLL1Q99990 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.01□□□□□ -0.33
VGLL1Q99990 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.01□□□□□ -0.33
VGLL1Q99990 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.01□□□□□ -0.33
VGLL1Q99990 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.01□□□□□ -0.33
VGLL1Q99990 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
VGLL1Q99990 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.01□□□□□ -0.33
VGLL1Q99990 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
VGLL1Q99990 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
VGLL1Q99990 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 AC008741.2-201ENST00000612792 3115 ntBASIC13□□□□□ -0.33
VGLL1Q99990 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13□□□□□ -0.33
VGLL1Q99990 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13□□□□□ -0.33
VGLL1Q99990 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
VGLL1Q99990 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms