Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHOX2BQ99453 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHOX2BQ99453 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.28■□□□□ 0.36
PHOX2BQ99453 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.28■□□□□ 0.36
PHOX2BQ99453 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.28■□□□□ 0.36
PHOX2BQ99453 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.28■□□□□ 0.36
PHOX2BQ99453 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PHOX2BQ99453 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.28■□□□□ 0.36
PHOX2BQ99453 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHOX2BQ99453 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.28■□□□□ 0.36
PHOX2BQ99453 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHOX2BQ99453 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.28■□□□□ 0.36
PHOX2BQ99453 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PHOX2BQ99453 AL353593.2-201ENST00000602529 1483 ntBASIC17.28■□□□□ 0.36
PHOX2BQ99453 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.28■□□□□ 0.36
PHOX2BQ99453 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHOX2BQ99453 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHOX2BQ99453 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.28■□□□□ 0.36
PHOX2BQ99453 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHOX2BQ99453 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.28■□□□□ 0.36
PHOX2BQ99453 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHOX2BQ99453 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHOX2BQ99453 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHOX2BQ99453 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.28■□□□□ 0.36
PHOX2BQ99453 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHOX2BQ99453 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.28■□□□□ 0.36
PHOX2BQ99453 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHOX2BQ99453 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHOX2BQ99453 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PHOX2BQ99453 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHOX2BQ99453 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHOX2BQ99453 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.27■□□□□ 0.36
PHOX2BQ99453 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.27■□□□□ 0.36
PHOX2BQ99453 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PHOX2BQ99453 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.27■□□□□ 0.36
PHOX2BQ99453 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PHOX2BQ99453 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHOX2BQ99453 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PHOX2BQ99453 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PHOX2BQ99453 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHOX2BQ99453 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHOX2BQ99453 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
PHOX2BQ99453 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
PHOX2BQ99453 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PHOX2BQ99453 KRT17P8-201ENST00000540749 863 ntBASIC17.27■□□□□ 0.36
PHOX2BQ99453 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.27■□□□□ 0.36
PHOX2BQ99453 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PHOX2BQ99453 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHOX2BQ99453 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.27■□□□□ 0.36
PHOX2BQ99453 AC005786.4-201ENST00000623369 682 ntBASIC17.27■□□□□ 0.36
PHOX2BQ99453 AC084121.4-201ENST00000641598 221 ntBASIC17.27■□□□□ 0.36
PHOX2BQ99453 AF228730.8-201ENST00000642140 221 ntBASIC17.27■□□□□ 0.36
PHOX2BQ99453 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHOX2BQ99453 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHOX2BQ99453 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.27■□□□□ 0.35
PHOX2BQ99453 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PHOX2BQ99453 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.27■□□□□ 0.35
PHOX2BQ99453 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.27■□□□□ 0.35
PHOX2BQ99453 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHOX2BQ99453 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
PHOX2BQ99453 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PHOX2BQ99453 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHOX2BQ99453 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHOX2BQ99453 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.26■□□□□ 0.35
PHOX2BQ99453 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHOX2BQ99453 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHOX2BQ99453 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHOX2BQ99453 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.26■□□□□ 0.35
PHOX2BQ99453 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHOX2BQ99453 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PHOX2BQ99453 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHOX2BQ99453 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.26■□□□□ 0.35
PHOX2BQ99453 AC096633.1-201ENST00000422446 749 ntBASIC17.26■□□□□ 0.35
PHOX2BQ99453 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.26■□□□□ 0.35
PHOX2BQ99453 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHOX2BQ99453 FAM185BP-201ENST00000443595 716 ntBASIC17.26■□□□□ 0.35
PHOX2BQ99453 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.26■□□□□ 0.35
PHOX2BQ99453 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHOX2BQ99453 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.26■□□□□ 0.35
PHOX2BQ99453 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.26■□□□□ 0.35
PHOX2BQ99453 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHOX2BQ99453 AL135744.1-201ENST00000565098 629 ntBASIC17.26■□□□□ 0.35
PHOX2BQ99453 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHOX2BQ99453 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHOX2BQ99453 MIR6080-201ENST00000617359 66 ntBASIC17.26■□□□□ 0.35
PHOX2BQ99453 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHOX2BQ99453 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.26■□□□□ 0.35
PHOX2BQ99453 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHOX2BQ99453 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PHOX2BQ99453 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHOX2BQ99453 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHOX2BQ99453 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PHOX2BQ99453 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PHOX2BQ99453 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PHOX2BQ99453 NOC2LP2-201ENST00000407594 1944 ntBASIC17.25■□□□□ 0.35
PHOX2BQ99453 AL031598.1-201ENST00000561511 1773 ntBASIC17.25■□□□□ 0.35
PHOX2BQ99453 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.25■□□□□ 0.35
PHOX2BQ99453 AC012313.1-201ENST00000593393 3059 ntBASIC17.25■□□□□ 0.35
PHOX2BQ99453 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.25■□□□□ 0.35
PHOX2BQ99453 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms