Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDK5RAP2Q96SN8 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDK5RAP2Q96SN8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.78
CDK5RAP2Q96SN8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 AC067863.1-201ENST00000494933 530 ntBASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 PRYP6-201ENST00000514804 343 ntBASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 AC004449.1-201ENST00000564240 433 ntBASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 MIR6080-201ENST00000617359 66 ntBASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 AC008267.7-201ENST00000624570 1194 ntBASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 PKD1P6-201ENST00000343738 4769 ntBASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.89■□□□□ 0.77
CDK5RAP2Q96SN8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 BANF1P1-201ENST00000553684 263 ntBASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 AC013467.2-201ENST00000605472 835 ntBASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 AL096865.1-201ENST00000606796 927 ntBASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 AC018470.1-201ENST00000624790 3129 ntBASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 ALG1L8P-201ENST00000533887 760 ntBASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 AL390955.2-201ENST00000603032 514 ntBASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 AL671710.1-201ENST00000610245 2349 ntBASIC19.88■□□□□ 0.77
CDK5RAP2Q96SN8 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.87■□□□□ 0.77
CDK5RAP2Q96SN8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
CDK5RAP2Q96SN8 PCDHB17P-201ENST00000539533 2393 ntBASIC19.87■□□□□ 0.77
CDK5RAP2Q96SN8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDK5RAP2Q96SN8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CDK5RAP2Q96SN8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CDK5RAP2Q96SN8 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDK5RAP2Q96SN8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDK5RAP2Q96SN8 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.87■□□□□ 0.77
CDK5RAP2Q96SN8 AC142381.1-201ENST00000426099 345 ntBASIC19.87■□□□□ 0.77
CDK5RAP2Q96SN8 AL671277.1-201ENST00000429656 993 ntBASIC19.87■□□□□ 0.77
CDK5RAP2Q96SN8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.87■□□□□ 0.77
CDK5RAP2Q96SN8 LINC01225-203ENST00000563550 1244 ntBASIC19.87■□□□□ 0.77
CDK5RAP2Q96SN8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.87■□□□□ 0.77
CDK5RAP2Q96SN8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.87■□□□□ 0.77
CDK5RAP2Q96SN8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CDK5RAP2Q96SN8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.87■□□□□ 0.77
CDK5RAP2Q96SN8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDK5RAP2Q96SN8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5RAP2Q96SN8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDK5RAP2Q96SN8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms