Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 AC109635.5-201ENST00000533593 962 ntBASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 AL391825.1-201ENST00000457671 1364 ntBASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 AL023806.1-201ENST00000603994 1649 ntBASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.41□□□□□ -0.1
CSMD1Q96PZ7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 AL355994.2-201ENST00000447882 704 ntBASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 AL590787.1-201ENST00000568856 1315 ntBASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 MIR1908-201ENST00000410394 80 ntBASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 SPDYE18-201ENST00000510091 1050 ntBASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 RN7SL190P-201ENST00000582519 257 ntBASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.4□□□□□ -0.1
CSMD1Q96PZ7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.4□□□□□ -0.11
CSMD1Q96PZ7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 CROCCP2-202ENST00000412962 2773 ntBASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 WASH6P-202ENST00000359512 1437 ntBASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 AC099548.2-209ENST00000480264 625 ntBASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 ZNF767P-206ENST00000513792 565 ntBASIC14.39□□□□□ -0.11
CSMD1Q96PZ7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms