Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 SLC25A1P3-201ENST00000395415 828 ntBASIC20.33■□□□□ 0.85
DDX11Q96FC9 RNA5SP415-201ENST00000517246 115 ntBASIC20.33■□□□□ 0.85
DDX11Q96FC9 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.33■□□□□ 0.85
DDX11Q96FC9 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.33■□□□□ 0.85
DDX11Q96FC9 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DDX11Q96FC9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
DDX11Q96FC9 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
DDX11Q96FC9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DDX11Q96FC9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
DDX11Q96FC9 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.33■□□□□ 0.84
DDX11Q96FC9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
DDX11Q96FC9 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX11Q96FC9 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX11Q96FC9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX11Q96FC9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX11Q96FC9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX11Q96FC9 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
DDX11Q96FC9 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DDX11Q96FC9 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX11Q96FC9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX11Q96FC9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DDX11Q96FC9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX11Q96FC9 BX005266.1-201ENST00000473402 457 ntBASIC20.32■□□□□ 0.84
DDX11Q96FC9 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.32■□□□□ 0.84
DDX11Q96FC9 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.32■□□□□ 0.84
DDX11Q96FC9 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.32■□□□□ 0.84
DDX11Q96FC9 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.32■□□□□ 0.84
DDX11Q96FC9 Z83851.2-201ENST00000609564 659 ntBASIC20.32■□□□□ 0.84
DDX11Q96FC9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.32■□□□□ 0.84
DDX11Q96FC9 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX11Q96FC9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
DDX11Q96FC9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX11Q96FC9 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.32■□□□□ 0.84
DDX11Q96FC9 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DDX11Q96FC9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX11Q96FC9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX11Q96FC9 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.31■□□□□ 0.84
DDX11Q96FC9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX11Q96FC9 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.31■□□□□ 0.84
DDX11Q96FC9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.31■□□□□ 0.84
DDX11Q96FC9 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX11Q96FC9 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.31■□□□□ 0.84
DDX11Q96FC9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DDX11Q96FC9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX11Q96FC9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX11Q96FC9 MYCLP1-201ENST00000372451 1075 ntBASIC20.31■□□□□ 0.84
DDX11Q96FC9 MED15P5-201ENST00000423150 992 ntBASIC20.31■□□□□ 0.84
DDX11Q96FC9 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.31■□□□□ 0.84
DDX11Q96FC9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.31■□□□□ 0.84
DDX11Q96FC9 AC103564.2-201ENST00000432853 1299 ntBASIC20.31■□□□□ 0.84
DDX11Q96FC9 AC034105.1-201ENST00000563488 319 ntBASIC20.31■□□□□ 0.84
DDX11Q96FC9 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.31■□□□□ 0.84
DDX11Q96FC9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DDX11Q96FC9 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.31■□□□□ 0.84
DDX11Q96FC9 AC140113.2-201ENST00000604370 208 ntBASIC20.31■□□□□ 0.84
DDX11Q96FC9 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
DDX11Q96FC9 FAM197Y3-203ENST00000618346 717 ntBASIC20.31■□□□□ 0.84
DDX11Q96FC9 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX11Q96FC9 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX11Q96FC9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DDX11Q96FC9 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX11Q96FC9 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
DDX11Q96FC9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
DDX11Q96FC9 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DDX11Q96FC9 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.31■□□□□ 0.84
DDX11Q96FC9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.31■□□□□ 0.84
DDX11Q96FC9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX11Q96FC9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX11Q96FC9 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX11Q96FC9 AC079776.2-201ENST00000641154 1609 ntBASIC20.31■□□□□ 0.84
DDX11Q96FC9 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DDX11Q96FC9 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.31■□□□□ 0.84
DDX11Q96FC9 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DDX11Q96FC9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX11Q96FC9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX11Q96FC9 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX11Q96FC9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
DDX11Q96FC9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
DDX11Q96FC9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.3■□□□□ 0.84
DDX11Q96FC9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.3■□□□□ 0.84
DDX11Q96FC9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDX11Q96FC9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
DDX11Q96FC9 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX11Q96FC9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
DDX11Q96FC9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDX11Q96FC9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX11Q96FC9 AC092053.1-201ENST00000605787 1936 ntBASIC20.3■□□□□ 0.84
DDX11Q96FC9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX11Q96FC9 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX11Q96FC9 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDX11Q96FC9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.3■□□□□ 0.84
DDX11Q96FC9 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.3■□□□□ 0.84
DDX11Q96FC9 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.3■□□□□ 0.84
DDX11Q96FC9 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.3■□□□□ 0.84
DDX11Q96FC9 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
DDX11Q96FC9 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
DDX11Q96FC9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.3■□□□□ 0.84
DDX11Q96FC9 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.3■□□□□ 0.84
DDX11Q96FC9 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.3■□□□□ 0.84
DDX11Q96FC9 AL356488.2-201ENST00000602755 427 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms