Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC1Q92922 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC21.67■■□□□ 1.06
SMARCC1Q92922 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC21.67■■□□□ 1.06
SMARCC1Q92922 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC1Q92922 AC021097.1-201ENST00000607902 574 ntBASIC21.67■■□□□ 1.06
SMARCC1Q92922 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC1Q92922 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC1Q92922 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SMARCC1Q92922 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMARCC1Q92922 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.67■■□□□ 1.06
SMARCC1Q92922 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.67■■□□□ 1.06
SMARCC1Q92922 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SMARCC1Q92922 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SMARCC1Q92922 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCC1Q92922 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCC1Q92922 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SMARCC1Q92922 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCC1Q92922 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCC1Q92922 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCC1Q92922 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCC1Q92922 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCC1Q92922 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
SMARCC1Q92922 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC21.66■■□□□ 1.06
SMARCC1Q92922 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC21.66■■□□□ 1.06
SMARCC1Q92922 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCC1Q92922 REEP4-207ENST00000523293 913 ntTSL 3 BASIC21.66■■□□□ 1.06
SMARCC1Q92922 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC21.66■■□□□ 1.06
SMARCC1Q92922 MPI-209ENST00000564003 1195 ntTSL 2 BASIC21.66■■□□□ 1.06
SMARCC1Q92922 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC21.66■■□□□ 1.06
SMARCC1Q92922 MPDU1-223ENST00000582151 728 ntBASIC21.66■■□□□ 1.06
SMARCC1Q92922 MIR6752-201ENST00000618442 71 ntBASIC21.66■■□□□ 1.06
SMARCC1Q92922 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC21.66■■□□□ 1.06
SMARCC1Q92922 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.66■■□□□ 1.06
SMARCC1Q92922 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCC1Q92922 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SMARCC1Q92922 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCC1Q92922 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCC1Q92922 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCC1Q92922 AC131009.4-201ENST00000624048 1740 ntBASIC21.66■■□□□ 1.06
SMARCC1Q92922 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SMARCC1Q92922 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SMARCC1Q92922 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMARCC1Q92922 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCC1Q92922 CU639417.3-201ENST00000624240 1404 ntBASIC21.65■■□□□ 1.06
SMARCC1Q92922 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.65■■□□□ 1.06
SMARCC1Q92922 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SMARCC1Q92922 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCC1Q92922 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC21.65■■□□□ 1.06
SMARCC1Q92922 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCC1Q92922 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.65■■□□□ 1.06
SMARCC1Q92922 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCC1Q92922 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SMARCC1Q92922 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC21.65■■□□□ 1.06
SMARCC1Q92922 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCC1Q92922 NAA50-208ENST00000497255 789 ntTSL 5 BASIC21.65■■□□□ 1.06
SMARCC1Q92922 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCC1Q92922 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC21.65■■□□□ 1.06
SMARCC1Q92922 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC21.65■■□□□ 1.06
SMARCC1Q92922 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCC1Q92922 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC21.65■■□□□ 1.06
SMARCC1Q92922 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCC1Q92922 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
SMARCC1Q92922 EGFEM1P-202ENST00000431685 1563 ntBASIC21.65■■□□□ 1.06
SMARCC1Q92922 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCC1Q92922 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SMARCC1Q92922 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SMARCC1Q92922 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
SMARCC1Q92922 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
SMARCC1Q92922 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SMARCC1Q92922 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
SMARCC1Q92922 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SMARCC1Q92922 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SMARCC1Q92922 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMARCC1Q92922 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMARCC1Q92922 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMARCC1Q92922 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC21.64■■□□□ 1.05
SMARCC1Q92922 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SMARCC1Q92922 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SMARCC1Q92922 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SMARCC1Q92922 SATB1-217ENST00000493952 626 ntTSL 3 BASIC21.64■■□□□ 1.05
SMARCC1Q92922 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC21.64■■□□□ 1.05
SMARCC1Q92922 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC21.64■■□□□ 1.05
SMARCC1Q92922 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMARCC1Q92922 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SMARCC1Q92922 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMARCC1Q92922 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
SMARCC1Q92922 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMARCC1Q92922 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
SMARCC1Q92922 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SMARCC1Q92922 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMARCC1Q92922 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SMARCC1Q92922 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
SMARCC1Q92922 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMARCC1Q92922 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SMARCC1Q92922 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SMARCC1Q92922 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SMARCC1Q92922 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.63■■□□□ 1.05
SMARCC1Q92922 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMARCC1Q92922 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SMARCC1Q92922 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms