Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SHC3Q92529 AL121912.1-201ENST00000603683 238 ntBASIC18.22■□□□□ 0.51
SHC3Q92529 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.22■□□□□ 0.51
SHC3Q92529 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SHC3Q92529 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SHC3Q92529 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SHC3Q92529 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
SHC3Q92529 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHC3Q92529 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHC3Q92529 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SHC3Q92529 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHC3Q92529 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHC3Q92529 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHC3Q92529 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHC3Q92529 KRT8P49-201ENST00000604166 1432 ntBASIC18.22■□□□□ 0.51
SHC3Q92529 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHC3Q92529 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.22■□□□□ 0.51
SHC3Q92529 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.22■□□□□ 0.51
SHC3Q92529 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
SHC3Q92529 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHC3Q92529 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.21■□□□□ 0.51
SHC3Q92529 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SHC3Q92529 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SHC3Q92529 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SHC3Q92529 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.21■□□□□ 0.51
SHC3Q92529 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SHC3Q92529 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHC3Q92529 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.21■□□□□ 0.51
SHC3Q92529 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.21■□□□□ 0.51
SHC3Q92529 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHC3Q92529 AC073621.1-201ENST00000392730 636 ntBASIC18.21■□□□□ 0.51
SHC3Q92529 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.21■□□□□ 0.51
SHC3Q92529 RPS2P1-201ENST00000434010 821 ntBASIC18.21■□□□□ 0.51
SHC3Q92529 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.21■□□□□ 0.51
SHC3Q92529 AC018712.1-201ENST00000455767 687 ntBASIC18.21■□□□□ 0.51
SHC3Q92529 RNPS1P1-201ENST00000507437 918 ntBASIC18.21■□□□□ 0.51
SHC3Q92529 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.21■□□□□ 0.51
SHC3Q92529 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.21■□□□□ 0.51
SHC3Q92529 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SHC3Q92529 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SHC3Q92529 AL691432.3-201ENST00000621860 400 ntBASIC18.21■□□□□ 0.51
SHC3Q92529 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.21■□□□□ 0.51
SHC3Q92529 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHC3Q92529 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SHC3Q92529 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHC3Q92529 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SHC3Q92529 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.21■□□□□ 0.51
SHC3Q92529 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SHC3Q92529 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.21■□□□□ 0.5
SHC3Q92529 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHC3Q92529 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SHC3Q92529 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SHC3Q92529 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SHC3Q92529 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SHC3Q92529 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.2■□□□□ 0.5
SHC3Q92529 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SHC3Q92529 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHC3Q92529 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.2■□□□□ 0.5
SHC3Q92529 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.2■□□□□ 0.5
SHC3Q92529 LINC00895-201ENST00000629028 1637 ntBASIC18.2■□□□□ 0.5
SHC3Q92529 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SHC3Q92529 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.2■□□□□ 0.5
SHC3Q92529 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHC3Q92529 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHC3Q92529 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.2■□□□□ 0.5
SHC3Q92529 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SHC3Q92529 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.2■□□□□ 0.5
SHC3Q92529 AC073648.2-201ENST00000510116 352 ntBASIC18.2■□□□□ 0.5
SHC3Q92529 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.2■□□□□ 0.5
SHC3Q92529 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.2■□□□□ 0.5
SHC3Q92529 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.2■□□□□ 0.5
SHC3Q92529 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.2■□□□□ 0.5
SHC3Q92529 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.2■□□□□ 0.5
SHC3Q92529 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SHC3Q92529 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.2■□□□□ 0.5
SHC3Q92529 AF228730.7-201ENST00000641842 219 ntBASIC18.2■□□□□ 0.5
SHC3Q92529 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHC3Q92529 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHC3Q92529 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHC3Q92529 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SHC3Q92529 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.2■□□□□ 0.5
SHC3Q92529 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SHC3Q92529 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHC3Q92529 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SHC3Q92529 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHC3Q92529 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SHC3Q92529 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SHC3Q92529 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SHC3Q92529 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC3Q92529 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHC3Q92529 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC3Q92529 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHC3Q92529 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.19■□□□□ 0.5
SHC3Q92529 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC3Q92529 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHC3Q92529 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC3Q92529 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC3Q92529 PCDHA14-201ENST00000506751 2298 ntBASIC18.19■□□□□ 0.5
SHC3Q92529 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHC3Q92529 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms