Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.36■□□□□ 0.37
PTCD2Q8WV60 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 AF186996.4-201ENST00000467186 377 ntBASIC17.36■□□□□ 0.37
PTCD2Q8WV60 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 AP001005.1-201ENST00000571755 1248 ntBASIC17.36■□□□□ 0.37
PTCD2Q8WV60 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 FAM215A-202ENST00000632077 792 ntBASIC17.36■□□□□ 0.37
PTCD2Q8WV60 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.36■□□□□ 0.37
PTCD2Q8WV60 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 AC092053.1-201ENST00000605787 1936 ntBASIC17.36■□□□□ 0.37
PTCD2Q8WV60 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTCD2Q8WV60 AC148477.5-201ENST00000625164 1645 ntBASIC17.36■□□□□ 0.37
PTCD2Q8WV60 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 AC012640.2-201ENST00000561606 901 ntBASIC17.35■□□□□ 0.37
PTCD2Q8WV60 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 AC079776.2-201ENST00000641154 1609 ntBASIC17.35■□□□□ 0.37
PTCD2Q8WV60 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTCD2Q8WV60 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 AC105020.1-201ENST00000435356 2205 ntBASIC17.34■□□□□ 0.37
PTCD2Q8WV60 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 SCARNA2-201ENST00000458748 420 ntBASIC17.34■□□□□ 0.37
PTCD2Q8WV60 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 AC073648.2-201ENST00000510116 352 ntBASIC17.34■□□□□ 0.37
PTCD2Q8WV60 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTCD2Q8WV60 SLC25A1P1-201ENST00000528351 927 ntBASIC17.34■□□□□ 0.37
PTCD2Q8WV60 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms