Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 AC021097.1-201ENST00000607902 574 ntBASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 AL008721.1-201ENST00000609964 604 ntBASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 AC003101.2-201ENST00000612557 442 ntBASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KLHDC9Q8NEP7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 FOXO1B-201ENST00000504678 1527 ntBASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 AC007274.1-201ENST00000439805 662 ntBASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 AC009477.1-201ENST00000452936 217 ntBASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 CYP2A7P1-201ENST00000595391 815 ntBASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 AC004233.3-201ENST00000607794 1269 ntBASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.66■□□□□ 0.58
KLHDC9Q8NEP7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 LINC00896-202ENST00000609602 2128 ntBASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 KRT8P49-201ENST00000604166 1432 ntBASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KLHDC9Q8NEP7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
KLHDC9Q8NEP7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
KLHDC9Q8NEP7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.64■□□□□ 0.58
KLHDC9Q8NEP7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KLHDC9Q8NEP7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
KLHDC9Q8NEP7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KLHDC9Q8NEP7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KLHDC9Q8NEP7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
KLHDC9Q8NEP7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KLHDC9Q8NEP7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms