Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC008894.3-201ENST00000624324 3103 ntBASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ZNF439Q8NDP4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 AC022211.2-201ENST00000585075 2527 ntBASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 AL135999.2-201ENST00000622438 1686 ntBASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 AC099336.1-202ENST00000602961 463 ntBASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 AC093458.2-201ENST00000623150 629 ntBASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 AP000867.4-201ENST00000641616 219 ntBASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF439Q8NDP4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
ZNF439Q8NDP4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF439Q8NDP4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF439Q8NDP4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
ZNF439Q8NDP4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF439Q8NDP4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF439Q8NDP4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF439Q8NDP4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.21□□□□□ -0.14
ZNF439Q8NDP4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
ZNF439Q8NDP4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF439Q8NDP4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF439Q8NDP4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
ZNF439Q8NDP4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF439Q8NDP4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
ZNF439Q8NDP4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF439Q8NDP4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF439Q8NDP4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF439Q8NDP4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
ZNF439Q8NDP4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ZNF439Q8NDP4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF439Q8NDP4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF439Q8NDP4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.2□□□□□ -0.14
ZNF439Q8NDP4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.2□□□□□ -0.14
ZNF439Q8NDP4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
ZNF439Q8NDP4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms