Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.46■□□□□ 0.38
KDM1BQ8NB78 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
KDM1BQ8NB78 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
KDM1BQ8NB78 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
KDM1BQ8NB78 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
KDM1BQ8NB78 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 AC011676.5-201ENST00000624864 2660 ntBASIC17.45■□□□□ 0.38
KDM1BQ8NB78 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KDM1BQ8NB78 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 AL121761.2-201ENST00000598007 1648 ntBASIC17.44■□□□□ 0.38
KDM1BQ8NB78 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 AC023274.1-201ENST00000418278 595 ntBASIC17.44■□□□□ 0.38
KDM1BQ8NB78 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
KDM1BQ8NB78 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 AC112482.1-201ENST00000492080 688 ntBASIC17.43■□□□□ 0.38
KDM1BQ8NB78 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.43■□□□□ 0.38
KDM1BQ8NB78 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
KDM1BQ8NB78 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KDM1BQ8NB78 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms