Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 TNRC18P3-201ENST00000441896 2691 ntBASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH20Q8N6Y1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 AC016396.2-201ENST00000562575 1417 ntBASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 AL671883.3-201ENST00000603274 991 ntBASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PCDH20Q8N6Y1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 GGTLC5P-201ENST00000617623 998 ntBASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH20Q8N6Y1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 AL591424.1-201ENST00000442569 1213 ntBASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 AC108073.2-201ENST00000464002 357 ntBASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PCDH20Q8N6Y1 AC027601.4-201ENST00000611259 610 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms