Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC33Q8N5R6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC33Q8N5R6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC33Q8N5R6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CCDC33Q8N5R6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC33Q8N5R6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC33Q8N5R6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC33Q8N5R6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC33Q8N5R6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC33Q8N5R6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC33Q8N5R6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CCDC33Q8N5R6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CCDC33Q8N5R6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC33Q8N5R6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
CCDC33Q8N5R6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 YBX2P1-201ENST00000394192 760 ntBASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 RPSAP43-201ENST00000402237 625 ntBASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 AC009947.1-201ENST00000444350 727 ntBASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 AC132938.5-201ENST00000624980 1813 ntBASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC33Q8N5R6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 AC023274.1-201ENST00000418278 595 ntBASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 AC112482.1-201ENST00000492080 688 ntBASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 AC040169.1-201ENST00000565382 521 ntBASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 MIR1199-201ENST00000621445 119 ntBASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC33Q8N5R6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CCDC33Q8N5R6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 GPX1P2-201ENST00000429271 606 ntBASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms