Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 PRORSD1P-202ENST00000563365 2154 ntBASIC16.53■□□□□ 0.24
KRT78Q8N1N4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 AF238378.1-201ENST00000526806 358 ntBASIC16.53■□□□□ 0.24
KRT78Q8N1N4 SART3-203ENST00000546611 1184 ntBASIC16.53■□□□□ 0.24
KRT78Q8N1N4 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 AC139887.3-201ENST00000568585 713 ntBASIC16.53■□□□□ 0.24
KRT78Q8N1N4 MTDHP4-201ENST00000600287 670 ntBASIC16.53■□□□□ 0.24
KRT78Q8N1N4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.53■□□□□ 0.24
KRT78Q8N1N4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT78Q8N1N4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT78Q8N1N4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT78Q8N1N4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT78Q8N1N4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
KRT78Q8N1N4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT78Q8N1N4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KRT78Q8N1N4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT78Q8N1N4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT78Q8N1N4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KRT78Q8N1N4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.52■□□□□ 0.24
KRT78Q8N1N4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT78Q8N1N4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT78Q8N1N4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
KRT78Q8N1N4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT78Q8N1N4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.52■□□□□ 0.24
KRT78Q8N1N4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KRT78Q8N1N4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.52■□□□□ 0.24
KRT78Q8N1N4 AL353135.1-201ENST00000606729 504 ntBASIC16.52■□□□□ 0.24
KRT78Q8N1N4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
KRT78Q8N1N4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KRT78Q8N1N4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT78Q8N1N4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT78Q8N1N4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT78Q8N1N4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT78Q8N1N4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.52■□□□□ 0.23
KRT78Q8N1N4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
KRT78Q8N1N4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
KRT78Q8N1N4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT78Q8N1N4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
KRT78Q8N1N4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.52■□□□□ 0.23
KRT78Q8N1N4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT78Q8N1N4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.52■□□□□ 0.23
KRT78Q8N1N4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.23
KRT78Q8N1N4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
KRT78Q8N1N4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT78Q8N1N4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT78Q8N1N4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT78Q8N1N4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 DUSP5P1-201ENST00000441325 1139 ntBASIC16.51■□□□□ 0.23
KRT78Q8N1N4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 AC064862.7-201ENST00000604520 867 ntBASIC16.51■□□□□ 0.23
KRT78Q8N1N4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT78Q8N1N4 AC060834.1-201ENST00000443027 2032 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms