Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 AKR1C7P-201ENST00000305623 895 ntBASIC17.04■□□□□ 0.32
APLFQ8IW19 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.04■□□□□ 0.32
APLFQ8IW19 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
APLFQ8IW19 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 POM121L3P-201ENST00000419331 1163 ntBASIC17.04■□□□□ 0.32
APLFQ8IW19 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.04■□□□□ 0.32
APLFQ8IW19 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.04■□□□□ 0.32
APLFQ8IW19 AC079776.4-201ENST00000511039 504 ntBASIC17.04■□□□□ 0.32
APLFQ8IW19 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.04■□□□□ 0.32
APLFQ8IW19 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
APLFQ8IW19 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.04■□□□□ 0.32
APLFQ8IW19 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.04■□□□□ 0.32
APLFQ8IW19 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.04■□□□□ 0.32
APLFQ8IW19 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.04■□□□□ 0.32
APLFQ8IW19 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
APLFQ8IW19 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
APLFQ8IW19 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
APLFQ8IW19 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.04■□□□□ 0.32
APLFQ8IW19 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
APLFQ8IW19 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
APLFQ8IW19 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.04■□□□□ 0.32
APLFQ8IW19 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
APLFQ8IW19 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.03■□□□□ 0.32
APLFQ8IW19 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.03■□□□□ 0.32
APLFQ8IW19 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
APLFQ8IW19 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.03■□□□□ 0.32
APLFQ8IW19 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
APLFQ8IW19 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.03■□□□□ 0.32
APLFQ8IW19 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
APLFQ8IW19 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.03■□□□□ 0.32
APLFQ8IW19 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.03■□□□□ 0.32
APLFQ8IW19 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.03■□□□□ 0.32
APLFQ8IW19 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.03■□□□□ 0.32
APLFQ8IW19 AC011840.4-201ENST00000578471 627 ntBASIC17.03■□□□□ 0.32
APLFQ8IW19 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
APLFQ8IW19 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.03■□□□□ 0.32
APLFQ8IW19 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.03■□□□□ 0.32
APLFQ8IW19 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
APLFQ8IW19 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
APLFQ8IW19 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.03■□□□□ 0.32
APLFQ8IW19 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
APLFQ8IW19 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.03■□□□□ 0.32
APLFQ8IW19 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
APLFQ8IW19 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
APLFQ8IW19 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
APLFQ8IW19 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.02■□□□□ 0.32
APLFQ8IW19 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
APLFQ8IW19 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
APLFQ8IW19 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.02■□□□□ 0.32
APLFQ8IW19 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.02■□□□□ 0.32
APLFQ8IW19 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.02■□□□□ 0.32
APLFQ8IW19 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.02■□□□□ 0.32
APLFQ8IW19 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.02■□□□□ 0.32
APLFQ8IW19 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
APLFQ8IW19 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
APLFQ8IW19 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
APLFQ8IW19 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
APLFQ8IW19 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APLFQ8IW19 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
APLFQ8IW19 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms