Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 CYP2A7P1-201ENST00000595391 815 ntBASIC17.37■□□□□ 0.37
DENND4AQ7Z401 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.37■□□□□ 0.37
DENND4AQ7Z401 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.37■□□□□ 0.37
DENND4AQ7Z401 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.37■□□□□ 0.37
DENND4AQ7Z401 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.37■□□□□ 0.37
DENND4AQ7Z401 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.37■□□□□ 0.37
DENND4AQ7Z401 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
DENND4AQ7Z401 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
DENND4AQ7Z401 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DENND4AQ7Z401 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.36■□□□□ 0.37
DENND4AQ7Z401 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DENND4AQ7Z401 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
DENND4AQ7Z401 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
DENND4AQ7Z401 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.36■□□□□ 0.37
DENND4AQ7Z401 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
DENND4AQ7Z401 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.36■□□□□ 0.37
DENND4AQ7Z401 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
DENND4AQ7Z401 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
DENND4AQ7Z401 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DENND4AQ7Z401 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DENND4AQ7Z401 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DENND4AQ7Z401 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.36■□□□□ 0.37
DENND4AQ7Z401 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DENND4AQ7Z401 AL355312.1-201ENST00000407115 2176 ntBASIC17.36■□□□□ 0.37
DENND4AQ7Z401 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 ACA64.2-201ENST00000459014 129 ntBASIC17.35■□□□□ 0.37
DENND4AQ7Z401 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 GIMAP3P-201ENST00000495150 836 ntBASIC17.35■□□□□ 0.37
DENND4AQ7Z401 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 NEFHP1-201ENST00000412845 2629 ntBASIC17.35■□□□□ 0.37
DENND4AQ7Z401 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 ZNF890P-202ENST00000530367 1156 ntBASIC17.35■□□□□ 0.37
DENND4AQ7Z401 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 MIR4492-201ENST00000581627 80 ntBASIC17.35■□□□□ 0.37
DENND4AQ7Z401 AL359881.2-201ENST00000602973 570 ntBASIC17.35■□□□□ 0.37
DENND4AQ7Z401 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.35■□□□□ 0.37
DENND4AQ7Z401 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
DENND4AQ7Z401 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.34■□□□□ 0.37
DENND4AQ7Z401 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
DENND4AQ7Z401 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DENND4AQ7Z401 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DENND4AQ7Z401 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DENND4AQ7Z401 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
DENND4AQ7Z401 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
DENND4AQ7Z401 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DENND4AQ7Z401 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DENND4AQ7Z401 HLA-H-201ENST00000383620 1096 ntBASIC17.34■□□□□ 0.37
DENND4AQ7Z401 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.34■□□□□ 0.37
DENND4AQ7Z401 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms