Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 PTCHD3P3-201ENST00000403073 906 ntBASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 AC092910.1-201ENST00000482027 1129 ntBASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 AC136632.2-201ENST00000512891 861 ntBASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 AL356488.2-201ENST00000602755 427 ntBASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 MIR1199-201ENST00000621445 119 ntBASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LYSMD3Q7Z3D4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 AC116407.3-201ENST00000623905 1129 ntBASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LYSMD3Q7Z3D4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 RPS15P9-201ENST00000494093 319 ntBASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 AC117500.6-201ENST00000624871 588 ntBASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 AL805961.1-202ENST00000641562 540 ntBASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LYSMD3Q7Z3D4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms