Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 FDX1P1-201ENST00000449115 551 ntBASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 SEC1P-202ENST00000473944 940 ntBASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 AC116353.5-201ENST00000638148 1699 ntBASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXR1Q6PIV2 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 AC078925.2-201ENST00000624013 1973 ntBASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 AL391807.1-203ENST00000604392 2365 ntBASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 AC100803.2-201ENST00000562459 1963 ntBASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXR1Q6PIV2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 FAAHP1-202ENST00000446499 1238 ntBASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 EMBP1-201ENST00000458200 901 ntBASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 LINC01711-201ENST00000598340 967 ntBASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.87■□□□□ 0.45
FOXR1Q6PIV2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms