Protein–RNA interactions for Protein: Q6PEY2

TUBA3E, Tubulin alpha-3E chain, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3EQ6PEY2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 AC122714.2-201ENST00000502787 707 ntBASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 AC139887.3-201ENST00000568585 713 ntBASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 AL139288.1-201ENST00000623748 933 ntBASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 AF228730.7-201ENST00000641842 219 ntBASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TUBA3EQ6PEY2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 DOC2GP-204ENST00000639052 2548 ntBASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 PCDH8P1-201ENST00000428983 2773 ntBASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA3EQ6PEY2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 RPS2P1-201ENST00000434010 821 ntBASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 SLC25A1P1-201ENST00000528351 927 ntBASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 NKAPP1-205ENST00000585790 367 ntBASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA3EQ6PEY2 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TUBA3EQ6PEY2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms