Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CDC42BPAQ5VT25 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CDC42BPAQ5VT25 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDC42BPAQ5VT25 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC25.5■■□□□ 1.67
CDC42BPAQ5VT25 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDC42BPAQ5VT25 REEP4-207ENST00000523293 913 ntTSL 3 BASIC25.5■■□□□ 1.67
CDC42BPAQ5VT25 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC25.5■■□□□ 1.67
CDC42BPAQ5VT25 PRR29-204ENST00000577953 565 ntTSL 4 BASIC25.5■■□□□ 1.67
CDC42BPAQ5VT25 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC25.5■■□□□ 1.67
CDC42BPAQ5VT25 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDC42BPAQ5VT25 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
CDC42BPAQ5VT25 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC25.5■■□□□ 1.67
CDC42BPAQ5VT25 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDC42BPAQ5VT25 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDC42BPAQ5VT25 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDC42BPAQ5VT25 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDC42BPAQ5VT25 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CDC42BPAQ5VT25 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDC42BPAQ5VT25 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC25.5■■□□□ 1.67
CDC42BPAQ5VT25 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDC42BPAQ5VT25 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CDC42BPAQ5VT25 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 HLA-V-204ENST00000476601 1289 ntBASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 PXK-206ENST00000463280 2825 ntTSL 2 BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 AC003101.2-201ENST00000612557 442 ntBASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC25.49■■□□□ 1.67
CDC42BPAQ5VT25 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42BPAQ5VT25 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42BPAQ5VT25 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC25.48■■□□□ 1.67
CDC42BPAQ5VT25 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42BPAQ5VT25 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC25.48■■□□□ 1.67
CDC42BPAQ5VT25 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC25.48■■□□□ 1.67
CDC42BPAQ5VT25 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC25.48■■□□□ 1.67
CDC42BPAQ5VT25 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42BPAQ5VT25 ZNF890P-202ENST00000530367 1156 ntBASIC25.48■■□□□ 1.67
CDC42BPAQ5VT25 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC25.48■■□□□ 1.67
CDC42BPAQ5VT25 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC25.48■■□□□ 1.67
CDC42BPAQ5VT25 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42BPAQ5VT25 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42BPAQ5VT25 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42BPAQ5VT25 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
CDC42BPAQ5VT25 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC25.48■■□□□ 1.67
CDC42BPAQ5VT25 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42BPAQ5VT25 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42BPAQ5VT25 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC25.48■■□□□ 1.67
CDC42BPAQ5VT25 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 STOM-203ENST00000538954 1257 ntTSL 5 BASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 RNA5-8SN1-201ENST00000610460 153 ntBASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 RNA5-8SN5-202ENST00000612463 153 ntBASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 RNA5-8SN4-201ENST00000613359 153 ntBASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 RNA5-8SN5-201ENST00000619471 153 ntBASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDC42BPAQ5VT25 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
CDC42BPAQ5VT25 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC25.46■■□□□ 1.67
CDC42BPAQ5VT25 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC25.46■■□□□ 1.67
CDC42BPAQ5VT25 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDC42BPAQ5VT25 AC140912.1-201ENST00000577171 1054 ntBASIC25.46■■□□□ 1.67
CDC42BPAQ5VT25 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
CDC42BPAQ5VT25 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC25.46■■□□□ 1.67
CDC42BPAQ5VT25 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
CDC42BPAQ5VT25 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms