Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 PGM5P2-202ENST00000637225 1043 ntBASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LDLRAP1Q5SW96 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 AL590787.1-201ENST00000568856 1315 ntBASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 AL645608.8-201ENST00000606034 2086 ntBASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 AC136632.2-201ENST00000512891 861 ntBASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 MIR7706-201ENST00000613747 67 ntBASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 EGFEM1P-202ENST00000431685 1563 ntBASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.05■□□□□ 0.32
LDLRAP1Q5SW96 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 AC006504.4-201ENST00000592118 1568 ntBASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 AC073621.1-201ENST00000392730 636 ntBASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 SLC25A1P3-201ENST00000395415 828 ntBASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 ELK2BP-201ENST00000415014 1224 ntBASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 AC012640.2-201ENST00000561606 901 ntBASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LDLRAP1Q5SW96 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms