Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.05■□□□□ 0.48
VARS2Q5ST30 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.05■□□□□ 0.48
VARS2Q5ST30 AC022145.2-201ENST00000598203 171 ntBASIC18.05■□□□□ 0.48
VARS2Q5ST30 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VARS2Q5ST30 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
VARS2Q5ST30 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
VARS2Q5ST30 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
VARS2Q5ST30 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VARS2Q5ST30 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VARS2Q5ST30 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.05■□□□□ 0.48
VARS2Q5ST30 AC116353.5-201ENST00000638148 1699 ntBASIC18.05■□□□□ 0.48
VARS2Q5ST30 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VARS2Q5ST30 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
VARS2Q5ST30 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VARS2Q5ST30 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VARS2Q5ST30 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VARS2Q5ST30 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VARS2Q5ST30 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.04■□□□□ 0.48
VARS2Q5ST30 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VARS2Q5ST30 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.04■□□□□ 0.48
VARS2Q5ST30 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.04■□□□□ 0.48
VARS2Q5ST30 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VARS2Q5ST30 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VARS2Q5ST30 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.04■□□□□ 0.48
VARS2Q5ST30 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VARS2Q5ST30 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.04■□□□□ 0.48
VARS2Q5ST30 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VARS2Q5ST30 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VARS2Q5ST30 MIR770-201ENST00000390219 98 ntBASIC18.04■□□□□ 0.48
VARS2Q5ST30 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
VARS2Q5ST30 COX20P2-201ENST00000452636 358 ntBASIC18.04■□□□□ 0.48
VARS2Q5ST30 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VARS2Q5ST30 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
VARS2Q5ST30 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.04■□□□□ 0.48
VARS2Q5ST30 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.04■□□□□ 0.48
VARS2Q5ST30 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
VARS2Q5ST30 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.04■□□□□ 0.48
VARS2Q5ST30 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VARS2Q5ST30 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
VARS2Q5ST30 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
VARS2Q5ST30 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VARS2Q5ST30 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
VARS2Q5ST30 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
VARS2Q5ST30 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VARS2Q5ST30 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VARS2Q5ST30 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.04■□□□□ 0.48
VARS2Q5ST30 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.04■□□□□ 0.48
VARS2Q5ST30 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.03■□□□□ 0.48
VARS2Q5ST30 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
VARS2Q5ST30 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VARS2Q5ST30 AC012569.1-201ENST00000591191 1524 ntBASIC18.03■□□□□ 0.48
VARS2Q5ST30 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VARS2Q5ST30 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.03■□□□□ 0.48
VARS2Q5ST30 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VARS2Q5ST30 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.03■□□□□ 0.48
VARS2Q5ST30 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.03■□□□□ 0.48
VARS2Q5ST30 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
VARS2Q5ST30 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VARS2Q5ST30 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VARS2Q5ST30 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.03■□□□□ 0.48
VARS2Q5ST30 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.03■□□□□ 0.48
VARS2Q5ST30 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VARS2Q5ST30 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VARS2Q5ST30 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.03■□□□□ 0.48
VARS2Q5ST30 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.03■□□□□ 0.48
VARS2Q5ST30 AL355306.1-201ENST00000415580 579 ntBASIC18.03■□□□□ 0.48
VARS2Q5ST30 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.03■□□□□ 0.48
VARS2Q5ST30 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.03■□□□□ 0.48
VARS2Q5ST30 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.03■□□□□ 0.48
VARS2Q5ST30 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.03■□□□□ 0.48
VARS2Q5ST30 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.03■□□□□ 0.48
VARS2Q5ST30 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.03■□□□□ 0.48
VARS2Q5ST30 AC108359.1-201ENST00000616451 1211 ntBASIC18.03■□□□□ 0.48
VARS2Q5ST30 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.03■□□□□ 0.48
VARS2Q5ST30 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
VARS2Q5ST30 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.03■□□□□ 0.48
VARS2Q5ST30 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VARS2Q5ST30 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VARS2Q5ST30 NOC2LP2-201ENST00000407594 1944 ntBASIC18.03■□□□□ 0.48
VARS2Q5ST30 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VARS2Q5ST30 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
VARS2Q5ST30 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VARS2Q5ST30 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
VARS2Q5ST30 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.03■□□□□ 0.48
VARS2Q5ST30 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VARS2Q5ST30 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.03■□□□□ 0.48
VARS2Q5ST30 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.03■□□□□ 0.48
VARS2Q5ST30 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
VARS2Q5ST30 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.02■□□□□ 0.48
VARS2Q5ST30 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VARS2Q5ST30 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
VARS2Q5ST30 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VARS2Q5ST30 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VARS2Q5ST30 AL353732.1-201ENST00000569618 1459 ntBASIC18.02■□□□□ 0.48
VARS2Q5ST30 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
VARS2Q5ST30 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VARS2Q5ST30 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VARS2Q5ST30 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VARS2Q5ST30 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
VARS2Q5ST30 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms