Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FREM1Q5H8C1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 AC023141.13-201ENST00000604991 943 ntBASIC14.97□□□□□ -0.01
FREM1Q5H8C1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 AC022211.2-201ENST00000585075 2527 ntBASIC14.97□□□□□ -0.01
FREM1Q5H8C1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 HTR5BP-201ENST00000430851 1154 ntBASIC14.97□□□□□ -0.01
FREM1Q5H8C1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 AL513480.1-201ENST00000451731 511 ntBASIC14.97□□□□□ -0.01
FREM1Q5H8C1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM1Q5H8C1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 RPS8P6-201ENST00000426177 609 ntBASIC14.96□□□□□ -0.01
FREM1Q5H8C1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM1Q5H8C1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
FREM1Q5H8C1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
FREM1Q5H8C1 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
FREM1Q5H8C1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.96□□□□□ -0.02
FREM1Q5H8C1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
FREM1Q5H8C1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
FREM1Q5H8C1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
FREM1Q5H8C1 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
FREM1Q5H8C1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
FREM1Q5H8C1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
FREM1Q5H8C1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM1Q5H8C1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM1Q5H8C1 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM1Q5H8C1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.95□□□□□ -0.02
FREM1Q5H8C1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM1Q5H8C1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.95□□□□□ -0.02
FREM1Q5H8C1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.95□□□□□ -0.02
FREM1Q5H8C1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.95□□□□□ -0.02
FREM1Q5H8C1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
FREM1Q5H8C1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.95□□□□□ -0.02
FREM1Q5H8C1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.95□□□□□ -0.02
FREM1Q5H8C1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.95□□□□□ -0.02
FREM1Q5H8C1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.95□□□□□ -0.02
FREM1Q5H8C1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.95□□□□□ -0.02
FREM1Q5H8C1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM1Q5H8C1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
FREM1Q5H8C1 AL121761.2-201ENST00000598007 1648 ntBASIC14.95□□□□□ -0.02
FREM1Q5H8C1 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM1Q5H8C1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM1Q5H8C1 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
FREM1Q5H8C1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM1Q5H8C1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms