Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDR1Q08345 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
DDR1Q08345 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
DDR1Q08345 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
DDR1Q08345 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC21.02■□□□□ 0.95
DDR1Q08345 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.01■□□□□ 0.95
DDR1Q08345 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDR1Q08345 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC21.01■□□□□ 0.95
DDR1Q08345 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DDR1Q08345 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC21.01■□□□□ 0.95
DDR1Q08345 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC21.01■□□□□ 0.95
DDR1Q08345 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC21.01■□□□□ 0.95
DDR1Q08345 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDR1Q08345 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDR1Q08345 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
DDR1Q08345 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDR1Q08345 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
DDR1Q08345 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
DDR1Q08345 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC21.01■□□□□ 0.95
DDR1Q08345 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC21.01■□□□□ 0.95
DDR1Q08345 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC21.01■□□□□ 0.95
DDR1Q08345 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC21.01■□□□□ 0.95
DDR1Q08345 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC21.01■□□□□ 0.95
DDR1Q08345 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DDR1Q08345 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC21.01■□□□□ 0.95
DDR1Q08345 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDR1Q08345 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
DDR1Q08345 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
DDR1Q08345 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC21.01■□□□□ 0.95
DDR1Q08345 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
DDR1Q08345 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DDR1Q08345 AC131009.4-201ENST00000624048 1740 ntBASIC21.01■□□□□ 0.95
DDR1Q08345 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDR1Q08345 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDR1Q08345 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
DDR1Q08345 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDR1Q08345 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
DDR1Q08345 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDR1Q08345 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDR1Q08345 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
DDR1Q08345 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDR1Q08345 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21■□□□□ 0.95
DDR1Q08345 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21■□□□□ 0.95
DDR1Q08345 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21■□□□□ 0.95
DDR1Q08345 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDR1Q08345 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDR1Q08345 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21■□□□□ 0.95
DDR1Q08345 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21■□□□□ 0.95
DDR1Q08345 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDR1Q08345 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC21■□□□□ 0.95
DDR1Q08345 RPL37AP1-201ENST00000412502 279 ntBASIC21■□□□□ 0.95
DDR1Q08345 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC21■□□□□ 0.95
DDR1Q08345 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC21■□□□□ 0.95
DDR1Q08345 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC21■□□□□ 0.95
DDR1Q08345 AC140912.1-201ENST00000577171 1054 ntBASIC21■□□□□ 0.95
DDR1Q08345 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC21■□□□□ 0.95
DDR1Q08345 LINC00896-202ENST00000609602 2128 ntBASIC21■□□□□ 0.95
DDR1Q08345 AC004790.1-201ENST00000612686 536 ntBASIC21■□□□□ 0.95
DDR1Q08345 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC21■□□□□ 0.95
DDR1Q08345 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
DDR1Q08345 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDR1Q08345 AC087499.5-201ENST00000452760 1342 ntBASIC21■□□□□ 0.95
DDR1Q08345 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
DDR1Q08345 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDR1Q08345 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDR1Q08345 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC21■□□□□ 0.95
DDR1Q08345 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21■□□□□ 0.95
DDR1Q08345 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
DDR1Q08345 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21■□□□□ 0.95
DDR1Q08345 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDR1Q08345 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.99■□□□□ 0.95
DDR1Q08345 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DDR1Q08345 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDR1Q08345 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
DDR1Q08345 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDR1Q08345 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
DDR1Q08345 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
DDR1Q08345 DGCR5-201ENST00000399539 862 ntBASIC20.99■□□□□ 0.95
DDR1Q08345 AC079776.1-201ENST00000401540 1152 ntBASIC20.99■□□□□ 0.95
DDR1Q08345 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.99■□□□□ 0.95
DDR1Q08345 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
DDR1Q08345 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DDR1Q08345 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.99■□□□□ 0.95
DDR1Q08345 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.99■□□□□ 0.95
DDR1Q08345 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DDR1Q08345 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDR1Q08345 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.99■□□□□ 0.95
DDR1Q08345 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.99■□□□□ 0.95
DDR1Q08345 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.99■□□□□ 0.95
DDR1Q08345 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.99■□□□□ 0.95
DDR1Q08345 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.99■□□□□ 0.95
DDR1Q08345 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDR1Q08345 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDR1Q08345 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
DDR1Q08345 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DDR1Q08345 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDR1Q08345 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
DDR1Q08345 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DDR1Q08345 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDR1Q08345 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms