Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H3AP68431 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H3AP68431 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.95□□□□□ -0.02
HIST1H3AP68431 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H3AP68431 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.95□□□□□ -0.02
HIST1H3AP68431 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H3AP68431 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HIST1H3AP68431 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.95□□□□□ -0.02
HIST1H3AP68431 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H3AP68431 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
HIST1H3AP68431 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H3AP68431 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.95□□□□□ -0.02
HIST1H3AP68431 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
HIST1H3AP68431 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H3AP68431 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H3AP68431 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.95□□□□□ -0.02
HIST1H3AP68431 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
HIST1H3AP68431 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H3AP68431 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H3AP68431 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.95□□□□□ -0.02
HIST1H3AP68431 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H3AP68431 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.95□□□□□ -0.02
HIST1H3AP68431 AF238378.1-201ENST00000526806 358 ntBASIC14.95□□□□□ -0.02
HIST1H3AP68431 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.95□□□□□ -0.02
HIST1H3AP68431 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H3AP68431 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.95□□□□□ -0.02
HIST1H3AP68431 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.95□□□□□ -0.02
HIST1H3AP68431 CLEC4GP1-201ENST00000596555 870 ntBASIC14.95□□□□□ -0.02
HIST1H3AP68431 MTDHP4-201ENST00000600287 670 ntBASIC14.95□□□□□ -0.02
HIST1H3AP68431 TERC-201ENST00000602385 541 ntBASIC14.95□□□□□ -0.02
HIST1H3AP68431 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.95□□□□□ -0.02
HIST1H3AP68431 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.95□□□□□ -0.02
HIST1H3AP68431 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H3AP68431 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.95□□□□□ -0.02
HIST1H3AP68431 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H3AP68431 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HIST1H3AP68431 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H3AP68431 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
HIST1H3AP68431 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H3AP68431 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.95□□□□□ -0.02
HIST1H3AP68431 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HIST1H3AP68431 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H3AP68431 AC078925.2-201ENST00000624013 1973 ntBASIC14.94□□□□□ -0.02
HIST1H3AP68431 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H3AP68431 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H3AP68431 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.94□□□□□ -0.02
HIST1H3AP68431 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.94□□□□□ -0.02
HIST1H3AP68431 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H3AP68431 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H3AP68431 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H3AP68431 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H3AP68431 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.94□□□□□ -0.02
HIST1H3AP68431 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H3AP68431 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H3AP68431 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.94□□□□□ -0.02
HIST1H3AP68431 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H3AP68431 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H3AP68431 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.94□□□□□ -0.02
HIST1H3AP68431 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.94□□□□□ -0.02
HIST1H3AP68431 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
HIST1H3AP68431 SCARNA2-201ENST00000458748 420 ntBASIC14.94□□□□□ -0.02
HIST1H3AP68431 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H3AP68431 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.94□□□□□ -0.02
HIST1H3AP68431 AC139887.3-201ENST00000568585 713 ntBASIC14.94□□□□□ -0.02
HIST1H3AP68431 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.94□□□□□ -0.02
HIST1H3AP68431 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HIST1H3AP68431 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H3AP68431 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H3AP68431 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H3AP68431 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H3AP68431 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H3AP68431 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.94□□□□□ -0.02
HIST1H3AP68431 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HIST1H3AP68431 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H3AP68431 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.94□□□□□ -0.02
HIST1H3AP68431 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HIST1H3AP68431 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.93□□□□□ -0.02
HIST1H3AP68431 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.93□□□□□ -0.02
HIST1H3AP68431 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HIST1H3AP68431 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
HIST1H3AP68431 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H3AP68431 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H3AP68431 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H3AP68431 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H3AP68431 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H3AP68431 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H3AP68431 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H3AP68431 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
HIST1H3AP68431 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
HIST1H3AP68431 AP002490.2-201ENST00000524791 560 ntBASIC14.93□□□□□ -0.02
HIST1H3AP68431 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
HIST1H3AP68431 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HIST1H3AP68431 LINC01711-201ENST00000598340 967 ntBASIC14.93□□□□□ -0.02
HIST1H3AP68431 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H3AP68431 AC004706.3-202ENST00000621574 984 ntBASIC14.93□□□□□ -0.02
HIST1H3AP68431 AC012313.10-201ENST00000623509 926 ntBASIC14.93□□□□□ -0.02
HIST1H3AP68431 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H3AP68431 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HIST1H3AP68431 AC243591.1-201ENST00000452967 1364 ntBASIC14.93□□□□□ -0.02
HIST1H3AP68431 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms