Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP46P62068 AC084018.2-201ENST00000613093 2607 ntBASIC17.97■□□□□ 0.47
USP46P62068 AL138688.1-201ENST00000624851 1594 ntBASIC17.97■□□□□ 0.47
USP46P62068 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP46P62068 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP46P62068 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP46P62068 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP46P62068 AC002310.6-201ENST00000624451 1377 ntBASIC17.97■□□□□ 0.47
USP46P62068 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
USP46P62068 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
USP46P62068 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP46P62068 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.97■□□□□ 0.47
USP46P62068 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.97■□□□□ 0.47
USP46P62068 MCCD1P2-201ENST00000423228 335 ntBASIC17.97■□□□□ 0.47
USP46P62068 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.97■□□□□ 0.47
USP46P62068 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
USP46P62068 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
USP46P62068 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP46P62068 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP46P62068 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.97■□□□□ 0.47
USP46P62068 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP46P62068 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
USP46P62068 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP46P62068 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
USP46P62068 BCAR1-209ENST00000546196 1340 ntBASIC17.97■□□□□ 0.47
USP46P62068 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.97■□□□□ 0.47
USP46P62068 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
USP46P62068 PP12613-201ENST00000424958 2230 ntBASIC17.96■□□□□ 0.47
USP46P62068 BCL2-203ENST00000589955 5011 ntBASIC17.96■□□□□ 0.47
USP46P62068 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.96■□□□□ 0.47
USP46P62068 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP46P62068 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP46P62068 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.96■□□□□ 0.47
USP46P62068 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
USP46P62068 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP46P62068 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP46P62068 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP46P62068 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP46P62068 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
USP46P62068 DNAJB3-201ENST00000446806 729 ntBASIC17.96■□□□□ 0.47
USP46P62068 ALG1L5P-201ENST00000482043 771 ntBASIC17.96■□□□□ 0.47
USP46P62068 CXCL1P1-201ENST00000502804 216 ntBASIC17.96■□□□□ 0.47
USP46P62068 KRT19P2-202ENST00000557173 1012 ntBASIC17.96■□□□□ 0.47
USP46P62068 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.96■□□□□ 0.47
USP46P62068 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
USP46P62068 MTDHP5-201ENST00000598980 586 ntBASIC17.96■□□□□ 0.47
USP46P62068 ACTL9-202ENST00000612068 1252 ntBASIC17.96■□□□□ 0.47
USP46P62068 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.96■□□□□ 0.47
USP46P62068 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP46P62068 PCDHA12-202ENST00000613593 2588 ntBASIC17.96■□□□□ 0.47
USP46P62068 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP46P62068 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
USP46P62068 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
USP46P62068 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
USP46P62068 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.96■□□□□ 0.47
USP46P62068 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
USP46P62068 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.96■□□□□ 0.46
USP46P62068 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
USP46P62068 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.95■□□□□ 0.46
USP46P62068 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.95■□□□□ 0.46
USP46P62068 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
USP46P62068 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP46P62068 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP46P62068 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
USP46P62068 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
USP46P62068 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP46P62068 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
USP46P62068 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
USP46P62068 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
USP46P62068 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP46P62068 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP46P62068 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP46P62068 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.95■□□□□ 0.46
USP46P62068 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP46P62068 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP46P62068 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP46P62068 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.95■□□□□ 0.46
USP46P62068 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.95■□□□□ 0.46
USP46P62068 FAM185BP-201ENST00000443595 716 ntBASIC17.95■□□□□ 0.46
USP46P62068 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.95■□□□□ 0.46
USP46P62068 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
USP46P62068 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.95■□□□□ 0.46
USP46P62068 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.95■□□□□ 0.46
USP46P62068 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC17.95■□□□□ 0.46
USP46P62068 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.95■□□□□ 0.46
USP46P62068 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
USP46P62068 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP46P62068 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.95■□□□□ 0.46
USP46P62068 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP46P62068 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP46P62068 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP46P62068 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
USP46P62068 AC025580.3-201ENST00000617932 1424 ntBASIC17.95■□□□□ 0.46
USP46P62068 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP46P62068 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP46P62068 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP46P62068 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.95■□□□□ 0.46
USP46P62068 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP46P62068 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
USP46P62068 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms