Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.19■□□□□ 0.34
AP1S1P61966 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S1P61966 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.19■□□□□ 0.34
AP1S1P61966 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
AP1S1P61966 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
AP1S1P61966 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
AP1S1P61966 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
AP1S1P61966 PMS2P1-201ENST00000431037 1228 ntBASIC17.19■□□□□ 0.34
AP1S1P61966 HCG4B-203ENST00000450128 991 ntBASIC17.19■□□□□ 0.34
AP1S1P61966 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.19■□□□□ 0.34
AP1S1P61966 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.19■□□□□ 0.34
AP1S1P61966 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.19■□□□□ 0.34
AP1S1P61966 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.19■□□□□ 0.34
AP1S1P61966 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.19■□□□□ 0.34
AP1S1P61966 FAM197Y3-203ENST00000618346 717 ntBASIC17.19■□□□□ 0.34
AP1S1P61966 REXO1L3P-201ENST00000622202 1288 ntBASIC17.19■□□□□ 0.34
AP1S1P61966 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S1P61966 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S1P61966 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.19■□□□□ 0.34
AP1S1P61966 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S1P61966 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S1P61966 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.19■□□□□ 0.34
AP1S1P61966 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
AP1S1P61966 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
AP1S1P61966 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.18■□□□□ 0.34
AP1S1P61966 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
AP1S1P61966 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP1S1P61966 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.18■□□□□ 0.34
AP1S1P61966 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
AP1S1P61966 FZD10-202ENST00000539839 3282 ntBASIC17.18■□□□□ 0.34
AP1S1P61966 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP1S1P61966 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP1S1P61966 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.18■□□□□ 0.34
AP1S1P61966 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
AP1S1P61966 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP1S1P61966 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP1S1P61966 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP1S1P61966 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
AP1S1P61966 MED15P5-201ENST00000423150 992 ntBASIC17.18■□□□□ 0.34
AP1S1P61966 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.18■□□□□ 0.34
AP1S1P61966 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.18■□□□□ 0.34
AP1S1P61966 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.18■□□□□ 0.34
AP1S1P61966 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.18■□□□□ 0.34
AP1S1P61966 KRT18P58-201ENST00000527480 1120 ntBASIC17.18■□□□□ 0.34
AP1S1P61966 AC107918.2-201ENST00000530817 355 ntBASIC17.18■□□□□ 0.34
AP1S1P61966 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.18■□□□□ 0.34
AP1S1P61966 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.18■□□□□ 0.34
AP1S1P61966 AC064836.3-201ENST00000607928 673 ntBASIC17.18■□□□□ 0.34
AP1S1P61966 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.18■□□□□ 0.34
AP1S1P61966 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP1S1P61966 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
AP1S1P61966 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP1S1P61966 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.18■□□□□ 0.34
AP1S1P61966 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.18■□□□□ 0.34
AP1S1P61966 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
AP1S1P61966 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
AP1S1P61966 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP1S1P61966 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP1S1P61966 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.18■□□□□ 0.34
AP1S1P61966 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP1S1P61966 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP1S1P61966 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP1S1P61966 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
AP1S1P61966 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP1S1P61966 TOP3BP1-201ENST00000420768 1380 ntBASIC17.17■□□□□ 0.34
AP1S1P61966 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.17■□□□□ 0.34
AP1S1P61966 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.17■□□□□ 0.34
AP1S1P61966 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.17■□□□□ 0.34
AP1S1P61966 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AP1S1P61966 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP1S1P61966 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AP1S1P61966 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.17■□□□□ 0.34
AP1S1P61966 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.17■□□□□ 0.34
AP1S1P61966 AC026471.1-201ENST00000564629 3026 ntBASIC17.17■□□□□ 0.34
AP1S1P61966 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.17■□□□□ 0.34
AP1S1P61966 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP1S1P61966 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
AP1S1P61966 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.17■□□□□ 0.34
AP1S1P61966 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
AP1S1P61966 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.17■□□□□ 0.34
AP1S1P61966 AP000347.1-202ENST00000435868 847 ntBASIC17.17■□□□□ 0.34
AP1S1P61966 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
AP1S1P61966 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
AP1S1P61966 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.17■□□□□ 0.34
AP1S1P61966 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.17■□□□□ 0.34
AP1S1P61966 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.17■□□□□ 0.34
AP1S1P61966 KRT8P49-201ENST00000604166 1432 ntBASIC17.17■□□□□ 0.34
AP1S1P61966 AC140113.2-201ENST00000604370 208 ntBASIC17.17■□□□□ 0.34
AP1S1P61966 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.17■□□□□ 0.34
AP1S1P61966 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AP1S1P61966 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
AP1S1P61966 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP1S1P61966 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AP1S1P61966 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
AP1S1P61966 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AP1S1P61966 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
AP1S1P61966 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
AP1S1P61966 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.17■□□□□ 0.34
AP1S1P61966 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
AP1S1P61966 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms