Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.98■□□□□ 0.15
CDH12P55289 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 LINC02199-201ENST00000506655 2702 ntBASIC15.98■□□□□ 0.15
CDH12P55289 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.98■□□□□ 0.15
CDH12P55289 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CDH12P55289 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.98■□□□□ 0.15
CDH12P55289 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.98■□□□□ 0.15
CDH12P55289 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
CDH12P55289 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.98■□□□□ 0.15
CDH12P55289 AC124947.2-201ENST00000547118 1133 ntBASIC15.98■□□□□ 0.15
CDH12P55289 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
CDH12P55289 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CDH12P55289 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.98■□□□□ 0.15
CDH12P55289 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.98■□□□□ 0.15
CDH12P55289 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.98■□□□□ 0.15
CDH12P55289 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.98■□□□□ 0.15
CDH12P55289 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.98■□□□□ 0.15
CDH12P55289 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CDH12P55289 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH12P55289 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CDH12P55289 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CDH12P55289 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH12P55289 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH12P55289 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH12P55289 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH12P55289 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
CDH12P55289 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH12P55289 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CDH12P55289 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.97■□□□□ 0.15
CDH12P55289 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.97■□□□□ 0.15
CDH12P55289 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
CDH12P55289 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CDH12P55289 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH12P55289 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH12P55289 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH12P55289 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH12P55289 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH12P55289 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH12P55289 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH12P55289 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH12P55289 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.97■□□□□ 0.15
CDH12P55289 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDH12P55289 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.97■□□□□ 0.15
CDH12P55289 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.97■□□□□ 0.15
CDH12P55289 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH12P55289 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.97■□□□□ 0.15
CDH12P55289 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.97■□□□□ 0.15
CDH12P55289 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.97■□□□□ 0.15
CDH12P55289 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.97■□□□□ 0.15
CDH12P55289 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH12P55289 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH12P55289 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH12P55289 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH12P55289 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH12P55289 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH12P55289 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CDH12P55289 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDH12P55289 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
CDH12P55289 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH12P55289 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDH12P55289 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH12P55289 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDH12P55289 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDH12P55289 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDH12P55289 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH12P55289 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.97■□□□□ 0.15
CDH12P55289 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH12P55289 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.96■□□□□ 0.15
CDH12P55289 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
CDH12P55289 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
CDH12P55289 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH12P55289 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.96■□□□□ 0.15
CDH12P55289 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
CDH12P55289 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms