Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKN2DP55273 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKN2DP55273 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDKN2DP55273 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKN2DP55273 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKN2DP55273 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDKN2DP55273 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDKN2DP55273 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDKN2DP55273 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKN2DP55273 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.89■□□□□ 0.29
CDKN2DP55273 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.89■□□□□ 0.29
CDKN2DP55273 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.89■□□□□ 0.29
CDKN2DP55273 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.89■□□□□ 0.29
CDKN2DP55273 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.89■□□□□ 0.29
CDKN2DP55273 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.89■□□□□ 0.29
CDKN2DP55273 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.89■□□□□ 0.29
CDKN2DP55273 AL139288.1-201ENST00000623748 933 ntBASIC16.89■□□□□ 0.29
CDKN2DP55273 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDKN2DP55273 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.89■□□□□ 0.29
CDKN2DP55273 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKN2DP55273 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
CDKN2DP55273 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDKN2DP55273 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDKN2DP55273 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKN2DP55273 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
CDKN2DP55273 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDKN2DP55273 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKN2DP55273 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKN2DP55273 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CDKN2DP55273 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.89■□□□□ 0.29
CDKN2DP55273 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.89■□□□□ 0.29
CDKN2DP55273 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CDKN2DP55273 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKN2DP55273 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
CDKN2DP55273 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.88■□□□□ 0.29
CDKN2DP55273 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKN2DP55273 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKN2DP55273 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.88■□□□□ 0.29
CDKN2DP55273 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKN2DP55273 TNRC18P3-201ENST00000441896 2691 ntBASIC16.88■□□□□ 0.29
CDKN2DP55273 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.88■□□□□ 0.29
CDKN2DP55273 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKN2DP55273 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKN2DP55273 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.88■□□□□ 0.29
CDKN2DP55273 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKN2DP55273 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDKN2DP55273 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKN2DP55273 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKN2DP55273 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDKN2DP55273 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKN2DP55273 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKN2DP55273 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.88■□□□□ 0.29
CDKN2DP55273 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKN2DP55273 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKN2DP55273 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDKN2DP55273 FGFR3P6-201ENST00000457012 610 ntBASIC16.88■□□□□ 0.29
CDKN2DP55273 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKN2DP55273 SART3-203ENST00000546611 1184 ntBASIC16.88■□□□□ 0.29
CDKN2DP55273 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.88■□□□□ 0.29
CDKN2DP55273 PRELID1P1-202ENST00000567272 903 ntBASIC16.88■□□□□ 0.29
CDKN2DP55273 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.88■□□□□ 0.29
CDKN2DP55273 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.88■□□□□ 0.29
CDKN2DP55273 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDKN2DP55273 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDKN2DP55273 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDKN2DP55273 PKD1P1-201ENST00000458669 6805 ntBASIC16.88■□□□□ 0.29
CDKN2DP55273 TUBB8P12-201ENST00000308911 1335 ntBASIC16.88■□□□□ 0.29
CDKN2DP55273 TUBB7P-202ENST00000428444 1305 ntBASIC16.88■□□□□ 0.29
CDKN2DP55273 TUBB8P7-204ENST00000567960 1332 ntBASIC16.88■□□□□ 0.29
CDKN2DP55273 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKN2DP55273 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKN2DP55273 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.88■□□□□ 0.29
CDKN2DP55273 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDKN2DP55273 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKN2DP55273 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKN2DP55273 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKN2DP55273 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.87■□□□□ 0.29
CDKN2DP55273 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDKN2DP55273 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
CDKN2DP55273 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDKN2DP55273 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKN2DP55273 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.87■□□□□ 0.29
CDKN2DP55273 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.87■□□□□ 0.29
CDKN2DP55273 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKN2DP55273 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKN2DP55273 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKN2DP55273 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDKN2DP55273 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.87■□□□□ 0.29
CDKN2DP55273 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDKN2DP55273 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.87■□□□□ 0.29
CDKN2DP55273 AC091304.2-201ENST00000564639 760 ntBASIC16.87■□□□□ 0.29
CDKN2DP55273 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.87■□□□□ 0.29
CDKN2DP55273 AC012313.10-201ENST00000623509 926 ntBASIC16.87■□□□□ 0.29
CDKN2DP55273 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKN2DP55273 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKN2DP55273 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CDKN2DP55273 AC243591.1-201ENST00000452967 1364 ntBASIC16.87■□□□□ 0.29
CDKN2DP55273 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.87■□□□□ 0.29
CDKN2DP55273 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKN2DP55273 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms