Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PDX1P52945 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.62■□□□□ 0.25
PDX1P52945 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDX1P52945 AL645939.2-201ENST00000427340 991 ntBASIC16.62■□□□□ 0.25
PDX1P52945 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
PDX1P52945 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDX1P52945 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.62■□□□□ 0.25
PDX1P52945 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.62■□□□□ 0.25
PDX1P52945 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.62■□□□□ 0.25
PDX1P52945 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.62■□□□□ 0.25
PDX1P52945 AC091812.2-201ENST00000619081 385 ntBASIC16.62■□□□□ 0.25
PDX1P52945 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.62■□□□□ 0.25
PDX1P52945 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDX1P52945 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDX1P52945 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDX1P52945 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDX1P52945 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDX1P52945 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDX1P52945 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
PDX1P52945 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PDX1P52945 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.62■□□□□ 0.25
PDX1P52945 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDX1P52945 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDX1P52945 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDX1P52945 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDX1P52945 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDX1P52945 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDX1P52945 AL355312.1-201ENST00000407115 2176 ntBASIC16.61■□□□□ 0.25
PDX1P52945 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PDX1P52945 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDX1P52945 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDX1P52945 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDX1P52945 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDX1P52945 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDX1P52945 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.61■□□□□ 0.25
PDX1P52945 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDX1P52945 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDX1P52945 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.61■□□□□ 0.25
PDX1P52945 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.61■□□□□ 0.25
PDX1P52945 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.61■□□□□ 0.25
PDX1P52945 AC074386.1-202ENST00000463561 864 ntBASIC16.61■□□□□ 0.25
PDX1P52945 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.61■□□□□ 0.25
PDX1P52945 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.61■□□□□ 0.25
PDX1P52945 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.61■□□□□ 0.25
PDX1P52945 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PDX1P52945 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PDX1P52945 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.61■□□□□ 0.25
PDX1P52945 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PDX1P52945 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.61■□□□□ 0.25
PDX1P52945 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDX1P52945 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.61■□□□□ 0.25
PDX1P52945 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.61■□□□□ 0.25
PDX1P52945 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDX1P52945 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDX1P52945 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PDX1P52945 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PDX1P52945 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PDX1P52945 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDX1P52945 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.61■□□□□ 0.25
PDX1P52945 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PDX1P52945 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.61■□□□□ 0.25
PDX1P52945 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDX1P52945 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDX1P52945 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PDX1P52945 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDX1P52945 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDX1P52945 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDX1P52945 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDX1P52945 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDX1P52945 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDX1P52945 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.6■□□□□ 0.25
PDX1P52945 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDX1P52945 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDX1P52945 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDX1P52945 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDX1P52945 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDX1P52945 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PDX1P52945 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDX1P52945 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.6■□□□□ 0.25
PDX1P52945 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.6■□□□□ 0.25
PDX1P52945 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDX1P52945 AP000344.2-201ENST00000512987 629 ntBASIC16.6■□□□□ 0.25
PDX1P52945 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.6■□□□□ 0.25
PDX1P52945 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PDX1P52945 MIR3197-201ENST00000582241 73 ntBASIC16.6■□□□□ 0.25
PDX1P52945 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.6■□□□□ 0.25
PDX1P52945 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.6■□□□□ 0.25
PDX1P52945 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.6■□□□□ 0.25
PDX1P52945 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDX1P52945 AC106028.4-201ENST00000614509 607 ntBASIC16.6■□□□□ 0.25
PDX1P52945 AC093028.1-201ENST00000622998 982 ntBASIC16.6■□□□□ 0.25
PDX1P52945 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDX1P52945 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PDX1P52945 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDX1P52945 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDX1P52945 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PDX1P52945 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PDX1P52945 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDX1P52945 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDX1P52945 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms