Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
GTF2A1P52655 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A1P52655 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A1P52655 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.82■□□□□ 0.28
GTF2A1P52655 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.82■□□□□ 0.28
GTF2A1P52655 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A1P52655 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.82■□□□□ 0.28
GTF2A1P52655 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
GTF2A1P52655 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.82■□□□□ 0.28
GTF2A1P52655 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GTF2A1P52655 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GTF2A1P52655 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A1P52655 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
GTF2A1P52655 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A1P52655 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A1P52655 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.82■□□□□ 0.28
GTF2A1P52655 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.82■□□□□ 0.28
GTF2A1P52655 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.82■□□□□ 0.28
GTF2A1P52655 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.82■□□□□ 0.28
GTF2A1P52655 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.82■□□□□ 0.28
GTF2A1P52655 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A1P52655 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A1P52655 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A1P52655 AC009090.5-201ENST00000624886 2285 ntBASIC16.82■□□□□ 0.28
GTF2A1P52655 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GTF2A1P52655 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A1P52655 AC023157.3-201ENST00000619086 2088 ntBASIC16.82■□□□□ 0.28
GTF2A1P52655 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
GTF2A1P52655 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A1P52655 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A1P52655 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
GTF2A1P52655 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A1P52655 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A1P52655 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A1P52655 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
GTF2A1P52655 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A1P52655 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GTF2A1P52655 STK40-201ENST00000359297 4837 ntTSL 2 BASIC16.81■□□□□ 0.28
GTF2A1P52655 CICP24-201ENST00000605464 2705 ntBASIC16.81■□□□□ 0.28
GTF2A1P52655 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A1P52655 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
GTF2A1P52655 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A1P52655 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.81■□□□□ 0.28
GTF2A1P52655 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A1P52655 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
GTF2A1P52655 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.81■□□□□ 0.28
GTF2A1P52655 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.81■□□□□ 0.28
GTF2A1P52655 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.81■□□□□ 0.28
GTF2A1P52655 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.81■□□□□ 0.28
GTF2A1P52655 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.81■□□□□ 0.28
GTF2A1P52655 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
GTF2A1P52655 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.81■□□□□ 0.28
GTF2A1P52655 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A1P52655 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A1P52655 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.81■□□□□ 0.28
GTF2A1P52655 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
GTF2A1P52655 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A1P52655 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
GTF2A1P52655 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A1P52655 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A1P52655 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A1P52655 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.81■□□□□ 0.28
GTF2A1P52655 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GTF2A1P52655 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A1P52655 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A1P52655 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A1P52655 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A1P52655 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GTF2A1P52655 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.8■□□□□ 0.28
GTF2A1P52655 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.8■□□□□ 0.28
GTF2A1P52655 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.8■□□□□ 0.28
GTF2A1P52655 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
GTF2A1P52655 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
GTF2A1P52655 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.8■□□□□ 0.28
GTF2A1P52655 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.8■□□□□ 0.28
GTF2A1P52655 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GTF2A1P52655 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GTF2A1P52655 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.8■□□□□ 0.28
GTF2A1P52655 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GTF2A1P52655 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.8■□□□□ 0.28
GTF2A1P52655 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.8■□□□□ 0.28
GTF2A1P52655 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
GTF2A1P52655 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.8■□□□□ 0.28
GTF2A1P52655 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.8■□□□□ 0.28
GTF2A1P52655 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.8■□□□□ 0.28
GTF2A1P52655 AC105036.2-201ENST00000569468 176 ntBASIC16.8■□□□□ 0.28
GTF2A1P52655 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.8■□□□□ 0.28
GTF2A1P52655 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GTF2A1P52655 AC117489.1-201ENST00000625169 3217 ntBASIC16.8■□□□□ 0.28
GTF2A1P52655 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
GTF2A1P52655 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
GTF2A1P52655 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
GTF2A1P52655 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GTF2A1P52655 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GTF2A1P52655 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GTF2A1P52655 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GTF2A1P52655 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GTF2A1P52655 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
GTF2A1P52655 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
GTF2A1P52655 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms