Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEK3P51956 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NEK3P51956 AL391005.1-201ENST00000623953 2435 ntBASIC17.68■□□□□ 0.42
NEK3P51956 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEK3P51956 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEK3P51956 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NEK3P51956 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.67■□□□□ 0.42
NEK3P51956 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEK3P51956 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.67■□□□□ 0.42
NEK3P51956 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEK3P51956 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NEK3P51956 SIGLEC16-201ENST00000599858 1437 ntBASIC17.67■□□□□ 0.42
NEK3P51956 PCDH8P1-201ENST00000428983 2773 ntBASIC17.67■□□□□ 0.42
NEK3P51956 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEK3P51956 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.67■□□□□ 0.42
NEK3P51956 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEK3P51956 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.67■□□□□ 0.42
NEK3P51956 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NEK3P51956 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.67■□□□□ 0.42
NEK3P51956 SPDYE21P-201ENST00000413323 827 ntBASIC17.67■□□□□ 0.42
NEK3P51956 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEK3P51956 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.67■□□□□ 0.42
NEK3P51956 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEK3P51956 AL049840.3-201ENST00000602669 611 ntBASIC17.67■□□□□ 0.42
NEK3P51956 AC019129.2-201ENST00000609837 1235 ntBASIC17.67■□□□□ 0.42
NEK3P51956 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.67■□□□□ 0.42
NEK3P51956 AL022326.1-202ENST00000641533 845 ntBASIC17.67■□□□□ 0.42
NEK3P51956 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NEK3P51956 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.67■□□□□ 0.42
NEK3P51956 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEK3P51956 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEK3P51956 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.67■□□□□ 0.42
NEK3P51956 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.67■□□□□ 0.42
NEK3P51956 IL9RP2-201ENST00000423948 1312 ntBASIC17.67■□□□□ 0.42
NEK3P51956 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEK3P51956 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEK3P51956 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NEK3P51956 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NEK3P51956 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NEK3P51956 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
NEK3P51956 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.66■□□□□ 0.42
NEK3P51956 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEK3P51956 PCDHB19P-201ENST00000570871 2371 ntBASIC17.66■□□□□ 0.42
NEK3P51956 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEK3P51956 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEK3P51956 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEK3P51956 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NEK3P51956 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NEK3P51956 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NEK3P51956 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.66■□□□□ 0.42
NEK3P51956 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.66■□□□□ 0.42
NEK3P51956 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NEK3P51956 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEK3P51956 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.66■□□□□ 0.42
NEK3P51956 AC139887.3-201ENST00000568585 713 ntBASIC17.66■□□□□ 0.42
NEK3P51956 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.66■□□□□ 0.42
NEK3P51956 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.66■□□□□ 0.42
NEK3P51956 AC109462.3-201ENST00000573934 613 ntBASIC17.66■□□□□ 0.42
NEK3P51956 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
NEK3P51956 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
NEK3P51956 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
NEK3P51956 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEK3P51956 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.66■□□□□ 0.42
NEK3P51956 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NEK3P51956 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.66■□□□□ 0.42
NEK3P51956 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NEK3P51956 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEK3P51956 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NEK3P51956 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NEK3P51956 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.66■□□□□ 0.42
NEK3P51956 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEK3P51956 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NEK3P51956 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEK3P51956 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
NEK3P51956 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NEK3P51956 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NEK3P51956 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NEK3P51956 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
NEK3P51956 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NEK3P51956 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.66■□□□□ 0.42
NEK3P51956 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.66■□□□□ 0.42
NEK3P51956 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NEK3P51956 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.66■□□□□ 0.42
NEK3P51956 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NEK3P51956 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NEK3P51956 AC243591.1-201ENST00000452967 1364 ntBASIC17.66■□□□□ 0.42
NEK3P51956 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
NEK3P51956 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEK3P51956 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
NEK3P51956 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.65■□□□□ 0.42
NEK3P51956 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NEK3P51956 AC016396.2-201ENST00000562575 1417 ntBASIC17.65■□□□□ 0.42
NEK3P51956 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.65■□□□□ 0.42
NEK3P51956 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEK3P51956 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEK3P51956 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEK3P51956 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEK3P51956 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEK3P51956 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.65■□□□□ 0.42
NEK3P51956 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms