Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL645728.1-201ENST00000366221 2101 ntBASIC17.91■□□□□ 0.46
SLC1A1P43005 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A1P43005 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SLC1A1P43005 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC1A1P43005 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.91■□□□□ 0.46
SLC1A1P43005 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.91■□□□□ 0.46
SLC1A1P43005 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A1P43005 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A1P43005 PRYP5-201ENST00000451909 266 ntBASIC17.91■□□□□ 0.46
SLC1A1P43005 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.91■□□□□ 0.46
SLC1A1P43005 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC1A1P43005 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC1A1P43005 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A1P43005 AL591684.3-201ENST00000605187 298 ntBASIC17.91■□□□□ 0.46
SLC1A1P43005 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC1A1P43005 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SLC1A1P43005 AL358472.4-201ENST00000633140 710 ntBASIC17.91■□□□□ 0.46
SLC1A1P43005 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A1P43005 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SLC1A1P43005 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A1P43005 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A1P43005 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A1P43005 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A1P43005 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
SLC1A1P43005 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC1A1P43005 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A1P43005 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A1P43005 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC1A1P43005 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A1P43005 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SLC1A1P43005 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A1P43005 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SLC1A1P43005 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SLC1A1P43005 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A1P43005 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A1P43005 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A1P43005 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A1P43005 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A1P43005 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC1A1P43005 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A1P43005 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A1P43005 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC1A1P43005 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A1P43005 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A1P43005 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A1P43005 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A1P43005 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC1A1P43005 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A1P43005 KRT16P4-201ENST00000453883 522 ntBASIC17.9■□□□□ 0.46
SLC1A1P43005 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC1A1P43005 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A1P43005 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.9■□□□□ 0.46
SLC1A1P43005 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SLC1A1P43005 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A1P43005 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SLC1A1P43005 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A1P43005 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
SLC1A1P43005 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A1P43005 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
SLC1A1P43005 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A1P43005 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
SLC1A1P43005 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A1P43005 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A1P43005 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A1P43005 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A1P43005 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A1P43005 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SLC1A1P43005 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
SLC1A1P43005 AP005117.1-201ENST00000584346 1413 ntBASIC17.89■□□□□ 0.46
SLC1A1P43005 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SLC1A1P43005 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
SLC1A1P43005 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SLC1A1P43005 UBALD1-205ENST00000590891 2641 ntBASIC17.89■□□□□ 0.46
SLC1A1P43005 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A1P43005 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SLC1A1P43005 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A1P43005 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC1A1P43005 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC1A1P43005 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A1P43005 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A1P43005 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A1P43005 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SLC1A1P43005 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC1A1P43005 NUS1P2-201ENST00000417358 873 ntBASIC17.89■□□□□ 0.45
SLC1A1P43005 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A1P43005 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A1P43005 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.89■□□□□ 0.45
SLC1A1P43005 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A1P43005 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A1P43005 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.89■□□□□ 0.45
SLC1A1P43005 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC1A1P43005 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC1A1P43005 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A1P43005 AC092119.3-201ENST00000612618 583 ntBASIC17.89■□□□□ 0.45
SLC1A1P43005 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SLC1A1P43005 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A1P43005 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A1P43005 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC1A1P43005 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC1A1P43005 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms