Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.21■□□□□ 0.35
LSP1P33241 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.21■□□□□ 0.35
LSP1P33241 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LSP1P33241 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 AP002414.2-201ENST00000591780 3365 ntBASIC17.21■□□□□ 0.35
LSP1P33241 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LSP1P33241 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
LSP1P33241 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.21■□□□□ 0.34
LSP1P33241 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LSP1P33241 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LSP1P33241 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LSP1P33241 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSP1P33241 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSP1P33241 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.2■□□□□ 0.34
LSP1P33241 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.2■□□□□ 0.34
LSP1P33241 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSP1P33241 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LSP1P33241 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSP1P33241 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.2■□□□□ 0.34
LSP1P33241 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LSP1P33241 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LSP1P33241 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.2■□□□□ 0.34
LSP1P33241 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSP1P33241 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.2■□□□□ 0.34
LSP1P33241 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSP1P33241 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LSP1P33241 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LSP1P33241 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.2■□□□□ 0.34
LSP1P33241 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.2■□□□□ 0.34
LSP1P33241 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.2■□□□□ 0.34
LSP1P33241 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.2■□□□□ 0.34
LSP1P33241 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.2■□□□□ 0.34
LSP1P33241 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.2■□□□□ 0.34
LSP1P33241 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.2■□□□□ 0.34
LSP1P33241 AC073195.1-201ENST00000607241 877 ntBASIC17.2■□□□□ 0.34
LSP1P33241 DGCR10-201ENST00000609839 495 ntBASIC17.2■□□□□ 0.34
LSP1P33241 ITM2C-210ENST00000620962 501 ntBASIC17.2■□□□□ 0.34
LSP1P33241 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSP1P33241 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSP1P33241 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.2■□□□□ 0.34
LSP1P33241 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LSP1P33241 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LSP1P33241 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSP1P33241 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSP1P33241 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSP1P33241 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LSP1P33241 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSP1P33241 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LSP1P33241 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSP1P33241 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.19■□□□□ 0.34
LSP1P33241 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.19■□□□□ 0.34
LSP1P33241 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.19■□□□□ 0.34
LSP1P33241 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSP1P33241 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LSP1P33241 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSP1P33241 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.19■□□□□ 0.34
LSP1P33241 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LSP1P33241 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
LSP1P33241 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSP1P33241 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSP1P33241 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSP1P33241 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSP1P33241 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSP1P33241 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LSP1P33241 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSP1P33241 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSP1P33241 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.19■□□□□ 0.34
LSP1P33241 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LSP1P33241 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.19■□□□□ 0.34
LSP1P33241 AP002490.2-201ENST00000524791 560 ntBASIC17.19■□□□□ 0.34
LSP1P33241 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LSP1P33241 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.19■□□□□ 0.34
LSP1P33241 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSP1P33241 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.19■□□□□ 0.34
LSP1P33241 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSP1P33241 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.19■□□□□ 0.34
LSP1P33241 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.19■□□□□ 0.34
LSP1P33241 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
LSP1P33241 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.19■□□□□ 0.34
LSP1P33241 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSP1P33241 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LSP1P33241 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.18■□□□□ 0.34
LSP1P33241 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.18■□□□□ 0.34
LSP1P33241 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSP1P33241 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.18■□□□□ 0.34
LSP1P33241 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
LSP1P33241 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LSP1P33241 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSP1P33241 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSP1P33241 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LSP1P33241 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSP1P33241 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms