Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SHC1P29353 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
SHC1P29353 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.72■□□□□ 0.11
SHC1P29353 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHC1P29353 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHC1P29353 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHC1P29353 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHC1P29353 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHC1P29353 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.72■□□□□ 0.11
SHC1P29353 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHC1P29353 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.72■□□□□ 0.11
SHC1P29353 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHC1P29353 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHC1P29353 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.72■□□□□ 0.11
SHC1P29353 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SHC1P29353 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHC1P29353 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHC1P29353 AC009336.1-201ENST00000608941 1553 ntBASIC15.72■□□□□ 0.11
SHC1P29353 AC046158.3-201ENST00000624947 2558 ntBASIC15.72■□□□□ 0.11
SHC1P29353 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHC1P29353 AC003669.1-201ENST00000334569 611 ntBASIC15.72■□□□□ 0.11
SHC1P29353 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.72■□□□□ 0.11
SHC1P29353 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SHC1P29353 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
SHC1P29353 MYCLP1-201ENST00000372451 1075 ntBASIC15.72■□□□□ 0.11
SHC1P29353 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.72■□□□□ 0.11
SHC1P29353 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.72■□□□□ 0.11
SHC1P29353 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
SHC1P29353 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.72■□□□□ 0.11
SHC1P29353 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
SHC1P29353 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.72■□□□□ 0.11
SHC1P29353 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
SHC1P29353 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.72■□□□□ 0.11
SHC1P29353 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.72■□□□□ 0.11
SHC1P29353 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SHC1P29353 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SHC1P29353 AC104692.2-201ENST00000603054 253 ntBASIC15.72■□□□□ 0.11
SHC1P29353 AL121912.1-201ENST00000603683 238 ntBASIC15.72■□□□□ 0.11
SHC1P29353 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.72■□□□□ 0.11
SHC1P29353 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
SHC1P29353 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHC1P29353 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.72■□□□□ 0.11
SHC1P29353 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
SHC1P29353 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHC1P29353 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.72■□□□□ 0.11
SHC1P29353 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SHC1P29353 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.72■□□□□ 0.11
SHC1P29353 AL356309.3-201ENST00000624132 1934 ntBASIC15.72■□□□□ 0.11
SHC1P29353 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SHC1P29353 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.72■□□□□ 0.11
SHC1P29353 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHC1P29353 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SHC1P29353 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHC1P29353 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHC1P29353 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHC1P29353 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHC1P29353 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHC1P29353 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SHC1P29353 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.71■□□□□ 0.11
SHC1P29353 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.71■□□□□ 0.11
SHC1P29353 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHC1P29353 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.71■□□□□ 0.11
SHC1P29353 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHC1P29353 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHC1P29353 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SHC1P29353 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.71■□□□□ 0.11
SHC1P29353 AC073592.4-201ENST00000623827 446 ntBASIC15.71■□□□□ 0.11
SHC1P29353 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SHC1P29353 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
SHC1P29353 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.71■□□□□ 0.11
SHC1P29353 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.71■□□□□ 0.11
SHC1P29353 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SHC1P29353 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHC1P29353 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHC1P29353 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SHC1P29353 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHC1P29353 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SHC1P29353 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SHC1P29353 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SHC1P29353 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
SHC1P29353 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SHC1P29353 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.71■□□□□ 0.1
SHC1P29353 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SHC1P29353 AC046185.3-201ENST00000623228 1824 ntBASIC15.71■□□□□ 0.1
SHC1P29353 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHC1P29353 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SHC1P29353 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.7■□□□□ 0.1
SHC1P29353 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SHC1P29353 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.7■□□□□ 0.1
SHC1P29353 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHC1P29353 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHC1P29353 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SHC1P29353 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SHC1P29353 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHC1P29353 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHC1P29353 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SHC1P29353 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SHC1P29353 AL020989.1-201ENST00000422979 469 ntBASIC15.7■□□□□ 0.1
SHC1P29353 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.7■□□□□ 0.1
SHC1P29353 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms