Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTGFP29279 HLA-H-201ENST00000383620 1096 ntBASIC19.03■□□□□ 0.64
CTGFP29279 AL080243.2-201ENST00000418783 582 ntBASIC19.03■□□□□ 0.64
CTGFP29279 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.03■□□□□ 0.64
CTGFP29279 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTGFP29279 AC119751.2-201ENST00000504529 210 ntBASIC19.03■□□□□ 0.64
CTGFP29279 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.03■□□□□ 0.64
CTGFP29279 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.03■□□□□ 0.64
CTGFP29279 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.03■□□□□ 0.64
CTGFP29279 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.03■□□□□ 0.64
CTGFP29279 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTGFP29279 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTGFP29279 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTGFP29279 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CTGFP29279 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.03■□□□□ 0.64
CTGFP29279 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
CTGFP29279 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTGFP29279 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CTGFP29279 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTGFP29279 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTGFP29279 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTGFP29279 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTGFP29279 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTGFP29279 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTGFP29279 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.02■□□□□ 0.64
CTGFP29279 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTGFP29279 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTGFP29279 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.02■□□□□ 0.64
CTGFP29279 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.02■□□□□ 0.64
CTGFP29279 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTGFP29279 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTGFP29279 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.02■□□□□ 0.64
CTGFP29279 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTGFP29279 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTGFP29279 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTGFP29279 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CTGFP29279 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.02■□□□□ 0.64
CTGFP29279 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.02■□□□□ 0.64
CTGFP29279 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTGFP29279 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.02■□□□□ 0.64
CTGFP29279 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC19.02■□□□□ 0.64
CTGFP29279 AC106886.1-201ENST00000568660 600 ntBASIC19.02■□□□□ 0.64
CTGFP29279 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.02■□□□□ 0.64
CTGFP29279 CYP2A7P1-201ENST00000595391 815 ntBASIC19.02■□□□□ 0.64
CTGFP29279 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.02■□□□□ 0.64
CTGFP29279 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.02■□□□□ 0.64
CTGFP29279 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTGFP29279 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
CTGFP29279 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CTGFP29279 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTGFP29279 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTGFP29279 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTGFP29279 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.01■□□□□ 0.63
CTGFP29279 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.01■□□□□ 0.63
CTGFP29279 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.01■□□□□ 0.63
CTGFP29279 SPDYE19P-201ENST00000338590 713 ntBASIC19.01■□□□□ 0.63
CTGFP29279 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTGFP29279 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.01■□□□□ 0.63
CTGFP29279 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.01■□□□□ 0.63
CTGFP29279 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.01■□□□□ 0.63
CTGFP29279 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CTGFP29279 AL033527.4-201ENST00000641026 673 ntBASIC19.01■□□□□ 0.63
CTGFP29279 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTGFP29279 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTGFP29279 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTGFP29279 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTGFP29279 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTGFP29279 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTGFP29279 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19■□□□□ 0.63
CTGFP29279 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CTGFP29279 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19■□□□□ 0.63
CTGFP29279 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19■□□□□ 0.63
CTGFP29279 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTGFP29279 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19■□□□□ 0.63
CTGFP29279 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CTGFP29279 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTGFP29279 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CTGFP29279 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CTGFP29279 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTGFP29279 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19■□□□□ 0.63
CTGFP29279 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CTGFP29279 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CTGFP29279 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19■□□□□ 0.63
CTGFP29279 AL353705.2-201ENST00000428243 662 ntBASIC19■□□□□ 0.63
CTGFP29279 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC19■□□□□ 0.63
CTGFP29279 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19■□□□□ 0.63
CTGFP29279 AC092658.1-201ENST00000505836 891 ntBASIC19■□□□□ 0.63
CTGFP29279 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19■□□□□ 0.63
CTGFP29279 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19■□□□□ 0.63
CTGFP29279 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19■□□□□ 0.63
CTGFP29279 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19■□□□□ 0.63
CTGFP29279 RAB43P1-201ENST00000561790 589 ntBASIC19■□□□□ 0.63
CTGFP29279 AC105021.1-202ENST00000570572 669 ntBASIC19■□□□□ 0.63
CTGFP29279 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19■□□□□ 0.63
CTGFP29279 MIR4492-201ENST00000581627 80 ntBASIC19■□□□□ 0.63
CTGFP29279 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19■□□□□ 0.63
CTGFP29279 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19■□□□□ 0.63
CTGFP29279 AP001350.2-201ENST00000625104 1094 ntBASIC19■□□□□ 0.63
CTGFP29279 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CTGFP29279 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms