Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
GDF1P27539 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GDF1P27539 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GDF1P27539 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GDF1P27539 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.5■□□□□ 0.07
GDF1P27539 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GDF1P27539 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GDF1P27539 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDF1P27539 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDF1P27539 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.49■□□□□ 0.07
GDF1P27539 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
GDF1P27539 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDF1P27539 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
GDF1P27539 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GDF1P27539 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDF1P27539 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.49■□□□□ 0.07
GDF1P27539 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
GDF1P27539 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDF1P27539 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDF1P27539 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDF1P27539 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GDF1P27539 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDF1P27539 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.49■□□□□ 0.07
GDF1P27539 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDF1P27539 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.49■□□□□ 0.07
GDF1P27539 SLC25A6P2-201ENST00000497974 877 ntBASIC15.49■□□□□ 0.07
GDF1P27539 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.49■□□□□ 0.07
GDF1P27539 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.49■□□□□ 0.07
GDF1P27539 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
GDF1P27539 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GDF1P27539 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDF1P27539 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
GDF1P27539 MTDHP5-201ENST00000598980 586 ntBASIC15.49■□□□□ 0.07
GDF1P27539 AC004877.2-201ENST00000623941 599 ntBASIC15.49■□□□□ 0.07
GDF1P27539 AC007064.4-201ENST00000637740 555 ntBASIC15.49■□□□□ 0.07
GDF1P27539 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDF1P27539 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDF1P27539 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDF1P27539 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
GDF1P27539 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
GDF1P27539 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDF1P27539 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
GDF1P27539 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
GDF1P27539 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
GDF1P27539 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GDF1P27539 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
GDF1P27539 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GDF1P27539 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GDF1P27539 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.49■□□□□ 0.07
GDF1P27539 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.49■□□□□ 0.07
GDF1P27539 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDF1P27539 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GDF1P27539 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GDF1P27539 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GDF1P27539 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
GDF1P27539 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GDF1P27539 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GDF1P27539 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.48■□□□□ 0.07
GDF1P27539 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.48■□□□□ 0.07
GDF1P27539 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
GDF1P27539 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GDF1P27539 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
GDF1P27539 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
GDF1P27539 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GDF1P27539 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GDF1P27539 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GDF1P27539 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GDF1P27539 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GDF1P27539 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GDF1P27539 UPF3AP3-201ENST00000420996 769 ntBASIC15.48■□□□□ 0.07
GDF1P27539 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.48■□□□□ 0.07
GDF1P27539 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.48■□□□□ 0.07
GDF1P27539 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.48■□□□□ 0.07
GDF1P27539 AL513190.1-201ENST00000621254 727 ntBASIC15.48■□□□□ 0.07
GDF1P27539 AC092865.6-201ENST00000642101 219 ntBASIC15.48■□□□□ 0.07
GDF1P27539 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
GDF1P27539 CROCCP2-202ENST00000412962 2773 ntBASIC15.48■□□□□ 0.07
GDF1P27539 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GDF1P27539 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GDF1P27539 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
GDF1P27539 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.48■□□□□ 0.07
GDF1P27539 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
GDF1P27539 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
GDF1P27539 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
GDF1P27539 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
GDF1P27539 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GDF1P27539 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.47■□□□□ 0.07
GDF1P27539 AC129492.6-201ENST00000611383 1305 ntBASIC15.47■□□□□ 0.07
GDF1P27539 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GDF1P27539 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.47■□□□□ 0.07
GDF1P27539 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
GDF1P27539 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GDF1P27539 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
GDF1P27539 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.47■□□□□ 0.07
GDF1P27539 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
GDF1P27539 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GDF1P27539 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GDF1P27539 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
GDF1P27539 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GDF1P27539 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms