Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARSP26640 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
VARSP26640 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARSP26640 AL136379.1-201ENST00000623471 2642 ntBASIC16.88■□□□□ 0.29
VARSP26640 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.88■□□□□ 0.29
VARSP26640 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARSP26640 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARSP26640 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VARSP26640 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARSP26640 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
VARSP26640 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARSP26640 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARSP26640 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARSP26640 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARSP26640 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VARSP26640 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VARSP26640 AC016396.2-201ENST00000562575 1417 ntBASIC16.87■□□□□ 0.29
VARSP26640 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARSP26640 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARSP26640 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.87■□□□□ 0.29
VARSP26640 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.87■□□□□ 0.29
VARSP26640 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.87■□□□□ 0.29
VARSP26640 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VARSP26640 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.87■□□□□ 0.29
VARSP26640 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARSP26640 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
VARSP26640 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARSP26640 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARSP26640 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARSP26640 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARSP26640 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARSP26640 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARSP26640 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.87■□□□□ 0.29
VARSP26640 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.87■□□□□ 0.29
VARSP26640 PMS2P1-201ENST00000431037 1228 ntBASIC16.87■□□□□ 0.29
VARSP26640 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.87■□□□□ 0.29
VARSP26640 AC079781.3-201ENST00000449110 356 ntBASIC16.87■□□□□ 0.29
VARSP26640 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
VARSP26640 AC079776.4-201ENST00000511039 504 ntBASIC16.87■□□□□ 0.29
VARSP26640 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
VARSP26640 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.87■□□□□ 0.29
VARSP26640 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.87■□□□□ 0.29
VARSP26640 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.87■□□□□ 0.29
VARSP26640 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.87■□□□□ 0.29
VARSP26640 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.87■□□□□ 0.29
VARSP26640 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.87■□□□□ 0.29
VARSP26640 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
VARSP26640 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VARSP26640 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARSP26640 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARSP26640 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARSP26640 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
VARSP26640 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARSP26640 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.87■□□□□ 0.29
VARSP26640 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VARSP26640 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARSP26640 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.86■□□□□ 0.29
VARSP26640 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VARSP26640 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
VARSP26640 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.86■□□□□ 0.29
VARSP26640 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
VARSP26640 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VARSP26640 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.86■□□□□ 0.29
VARSP26640 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARSP26640 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARSP26640 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VARSP26640 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARSP26640 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARSP26640 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARSP26640 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.86■□□□□ 0.29
VARSP26640 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.86■□□□□ 0.29
VARSP26640 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARSP26640 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARSP26640 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.86■□□□□ 0.29
VARSP26640 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.86■□□□□ 0.29
VARSP26640 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARSP26640 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.86■□□□□ 0.29
VARSP26640 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
VARSP26640 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.86■□□□□ 0.29
VARSP26640 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VARSP26640 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
VARSP26640 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VARSP26640 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
VARSP26640 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
VARSP26640 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VARSP26640 PCDHB19P-201ENST00000570871 2371 ntBASIC16.86■□□□□ 0.29
VARSP26640 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VARSP26640 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VARSP26640 AL353593.2-201ENST00000602529 1483 ntBASIC16.86■□□□□ 0.29
VARSP26640 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.86■□□□□ 0.29
VARSP26640 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.85■□□□□ 0.29
VARSP26640 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VARSP26640 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.85■□□□□ 0.29
VARSP26640 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.85■□□□□ 0.29
VARSP26640 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VARSP26640 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VARSP26640 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VARSP26640 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VARSP26640 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
VARSP26640 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms