Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.72□□□□□ -0.05
CD40P25942 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD40P25942 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD40P25942 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD40P25942 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD40P25942 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.72□□□□□ -0.05
CD40P25942 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD40P25942 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.72□□□□□ -0.05
CD40P25942 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CD40P25942 AL133373.2-201ENST00000623187 2828 ntBASIC14.72□□□□□ -0.05
CD40P25942 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.72□□□□□ -0.05
CD40P25942 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.72□□□□□ -0.05
CD40P25942 AC116353.5-201ENST00000638148 1699 ntBASIC14.72□□□□□ -0.05
CD40P25942 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.72□□□□□ -0.05
CD40P25942 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD40P25942 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD40P25942 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD40P25942 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD40P25942 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD40P25942 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CD40P25942 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD40P25942 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
CD40P25942 MKNK2P1-201ENST00000437526 628 ntBASIC14.72□□□□□ -0.05
CD40P25942 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CD40P25942 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.72□□□□□ -0.05
CD40P25942 ALG1L5P-201ENST00000482043 771 ntBASIC14.72□□□□□ -0.05
CD40P25942 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.72□□□□□ -0.05
CD40P25942 AC107918.2-201ENST00000530817 355 ntBASIC14.72□□□□□ -0.05
CD40P25942 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CD40P25942 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CD40P25942 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.72□□□□□ -0.05
CD40P25942 AL078644.1-201ENST00000609881 752 ntBASIC14.72□□□□□ -0.05
CD40P25942 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.72□□□□□ -0.05
CD40P25942 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.72□□□□□ -0.05
CD40P25942 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.72□□□□□ -0.05
CD40P25942 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD40P25942 AC134684.3-201ENST00000641758 218 ntBASIC14.72□□□□□ -0.05
CD40P25942 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD40P25942 AC067852.2-201ENST00000590513 2313 ntBASIC14.72□□□□□ -0.05
CD40P25942 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.72□□□□□ -0.05
CD40P25942 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CD40P25942 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.72□□□□□ -0.05
CD40P25942 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD40P25942 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.72□□□□□ -0.05
CD40P25942 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CD40P25942 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CD40P25942 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CD40P25942 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CD40P25942 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CD40P25942 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD40P25942 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.71□□□□□ -0.05
CD40P25942 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.71□□□□□ -0.05
CD40P25942 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD40P25942 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.71□□□□□ -0.05
CD40P25942 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD40P25942 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.71□□□□□ -0.05
CD40P25942 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CD40P25942 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD40P25942 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD40P25942 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD40P25942 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD40P25942 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CD40P25942 SLC25A1P3-201ENST00000395415 828 ntBASIC14.71□□□□□ -0.05
CD40P25942 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.71□□□□□ -0.05
CD40P25942 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.71□□□□□ -0.05
CD40P25942 RPS8P6-201ENST00000426177 609 ntBASIC14.71□□□□□ -0.05
CD40P25942 YBX1P5-201ENST00000509441 847 ntBASIC14.71□□□□□ -0.05
CD40P25942 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CD40P25942 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
CD40P25942 MIR4469-201ENST00000583919 79 ntBASIC14.71□□□□□ -0.05
CD40P25942 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.71□□□□□ -0.05
CD40P25942 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.71□□□□□ -0.05
CD40P25942 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD40P25942 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CD40P25942 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CD40P25942 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.71□□□□□ -0.05
CD40P25942 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD40P25942 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CD40P25942 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CD40P25942 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CD40P25942 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
CD40P25942 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CD40P25942 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CD40P25942 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CD40P25942 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CD40P25942 MCC-208ENST00000514701 2855 ntTSL 2 BASIC14.71□□□□□ -0.06
CD40P25942 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CD40P25942 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CD40P25942 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CD40P25942 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CD40P25942 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD40P25942 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD40P25942 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD40P25942 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
CD40P25942 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD40P25942 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.7□□□□□ -0.06
CD40P25942 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD40P25942 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD40P25942 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD40P25942 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms